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Name : SNSL254_A0342 (SNSL254_A0342) Accession : YP_002039546.1 Strain : Salmonella enterica SL254 Genome accession: NC_011080 Putative virulence/resistance : Unknown Product : LysR family transcriptional regulator SinR Function : - COG functional category : K : Transcription COG ID : COG0583 EC number : - Position : 353121 - 354068 bp Length : 948 bp Strand : + Note : identified by match to protein family HMM PF00126; match to protein family HMM PF03466 DNA sequence : ATGATGGAACAGATCAATAATCGTGGTATGCGAGACTGGATGATATTTATTAAAGTGGCGGAAGTAGGGAATCTTTCCCG GGCTGCGCGGGAATTAGATATTAGCATTTCTGCTGTCAGTAAATCGCTTAGTCGCCTTGAGAATTCTATTGAGGTTACTT TACTTCGGCGCGATGCACATCACTTAGAACTGACTGGAGCTGGTCAGACAGCCTATGCAAGCATGAAAAGGATAACATCT TCCTTTCAGTCCTTGCTGGATGAATTGCGAAATCCGGATAAAATTATCAGAGGGAGTATAAAATTTTCGGCTCCGGCTAT TGTCTGTGAGTTTCTTGCCAATAAGTGGATATGGGAATTTACAGCTAGCTATCCGGATACAAAAATCTACCTGGATTCAC GAGAGCGTAGCGATTTTTTTAGTAAATCCCTGGAGTTTGATGAGCTGGTTTTTAAAAGTGGCATAATCGAAAGTGAGGAT CTCGTGTATCGAAAGATAAGCCCTTTAAAGTTGGTTCTTTGTGCGAGTCCGAAATATATCAGAAAATATGGCAGGATCTC ACATCCTGGCGATTTGGAAAATCACATTATTGTGGGTCTTCACAACCATGGTCTTTCCGGACCTCTTACTCTTTTCCGTC AAGATGAATCATACACTATTAGTGGCGCTGTTAATGTTCATTTATCTTCCAATAATCTTTTGAGTGTTCTTAATTTGGTT TTAGAAGGAAAGGGTATCAACCTCATGACTCCGGCCTGGCTTGCCACCAAATACTTAAAAAATAATGAACTTGAAATTAT ACTTCCTGAATGGAGGGTTCCAGATCTCCCCATTTATCTTGTATGGCGTCATCGTCAGTATTATTCTCCTTTATTTCAAC GCTTTCTGTCTTTTATTGAAGATAAATGGAATAATCGCCCACAAATTGATTTTCTGAACGATGATTAA Protein sequence : MMEQINNRGMRDWMIFIKVAEVGNLSRAARELDISISAVSKSLSRLENSIEVTLLRRDAHHLELTGAGQTAYASMKRITS SFQSLLDELRNPDKIIRGSIKFSAPAIVCEFLANKWIWEFTASYPDTKIYLDSRERSDFFSKSLEFDELVFKSGIIESED LVYRKISPLKLVLCASPKYIRKYGRISHPGDLENHIIVGLHNHGLSGPLTLFRQDESYTISGAVNVHLSSNNLLSVLNLV LEGKGINLMTPAWLATKYLKNNELEIILPEWRVPDLPIYLVWRHRQYYSPLFQRFLSFIEDKWNNRPQIDFLNDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sinR | NP_454910.1 | LysR-family transcriptional regulator SinR | Not tested | SPI-6 | Protein | 6e-134 | 99 |
