Gene Information

Name : SeHA_C1200 (SeHA_C1200)
Accession : YP_002045091.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Virulence
Product : chaperone protein SigE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1182598 - 1182939 bp
Length : 342 bp
Strand : -
Note : identified by match to protein family HMM PF07824

DNA sequence : 
ATGGAAAGTCTATTAAATCGTTTATATGACGCGTTAGGCCTGGATGCGCCAGAAGATGAGCCACTGCTTATCATTGATGA
TGGGATACAGGTTTATTTTAATGAATCCGATCATACACTGGAAATGTGCTGTCCCTTTATGCCATTGCCTGACGACATCC
TGACTTTGCAGCATTTTTTACGTCTGAACTACACCAGCGCCGTCACTATCGGCGCTGACGCAGACAATACTGCTTTAGTG
GCGCTTTATCGCTTGCCGCAAACCAGTACCGAAGAAGAGGCGCTCACTGGTTTTGAATTATTCATTTCAAACGTGAAGCA
ATTGAAAGAGCATTATGCATAA

Protein sequence : 
MESLLNRLYDALGLDAPEDEPLLIIDDGIQVYFNESDHTLEMCCPFMPLPDDILTLQHFLRLNYTSAVTIGADADNTALV
ALYRLPQTSTEEEALTGFELFISNVKQLKEHYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipC YP_216029.1 hypothetical protein Virulence SPI-5 Protein 2e-47 100
pipC NP_460063.1 pathogenicity island-encoded protein C Virulence SPI-5 Protein 2e-47 100
pipC AAC33724.1 PipC Virulence SPI-5 Protein 3e-47 99
sigE NP_455587.1 cell invasion protein Virulence SPI-5 Protein 7e-47 99
sigE AAS66828.1 SigE Not tested SSR-1 Protein 2e-20 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeHA_C1200 YP_002045091.1 chaperone protein SigE VFG0591 Protein 5e-48 100