Gene Information

Name : ndpA (SeHA_C2463)
Accession : YP_002046281.1
Strain : Salmonella enterica SL476
Genome accession: NC_011083
Putative virulence/resistance : Unknown
Product : nucleoid-associated protein NdpA
Function : -
COG functional category : R : General function prediction only
COG ID : COG3081
EC number : -
Position : 2375061 - 2376068 bp
Length : 1008 bp
Strand : -
Note : identified by match to protein family HMM PF04245

DNA sequence :
ATGAGTCTGGATATCAACCAGATTGCCCTGCACCAGCTTATCAAGCGCGATGAGCAAAATCTTGAGCTGGTCTTGCGCGA
TTCATTGCTGGAGCCGACAACCACCGTTGTCGAGATGGTGGCTGAACTGCATCGGGTCTATAGCGCCAAGAATAAGGCGT
ATGGCCTGTTTAATGAAGAGAGTGAACTGGCGCAAGCGCTGCGGTTGCAACGTCAGGGGGAAGAAGATTTTCTTGCCTTT
AGCCGGGCGGCGACCGGACGCCTGCGTGACGAACTGGCGAAATATCCCTTTGCGGACGGCGGCATTGTATTGTTCTGCCA
TTATCGTTACCTGGCGGTGGAGTATCTGCTGGTTACGGTACTGAACAACCTGAGCAGTATGCGGGTCAATGAAAATCTGG
ACATTAACCCGACGCATTATCTTGATATTAACCATGCGGATATCGTGGCGCGTATCGATCTTACCGAGTGGGAAACTAAT
CCGCAATCGACCCGCTACCTGACGTTCCTGAAAGGTCGGGTAGGGCGCAAGGTCGCTGACTTCTTTATGGATTTCCTCGG
CGCCAGCGAAGGGTTGAACGCCAAAGCGCAGAATCGCGGCCTGTTGCAGGCAGTGGATGATTTCACCGCAGAAGCGCAGT
TGGATAAAGCAGAACGTCAGAACGTGCGCCAGCAGGTGTACAGCTACTGCAATGAGCAATTACAAGCCGGGGAAGAGATT
GAACTGGAATCGCTGTCTAAAGAGCTTTCCGGCGTCAGTGAAGTCAGCTTCAGCGAATTTACCGCCGAAAAAGGCTATGA
GCTGGAAGAGAGCTTCCCGGCAGATCGCAGTACGCTACGCCAGTTAACCAAATATGCCGGCAGCGGCGGCGGGTTAACGA
TTAACTTTGATGCGATGCTACTGGGCGAGCGGATTTTCTGGGACCCGGCGACCGATACCCTGACTATCAAAGGGACGCCG
CCGAATTTGCGCGATCAGTTGCAGCGACGCACGTCGGGCGGGAAATAA

Protein sequence :
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFNEESELAQALRLQRQGEEDFLAF
SRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
PQSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
ELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP
PNLRDQLQRRTSGGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01050 YP_001437154.1 nucleoid-associated protein NdpA Not tested Not named Protein 6e-133 91