Name : SeHA_C2950 (SeHA_C2950) Accession : YP_002046732.1 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Virulence Product : ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 2892080 - 2895736 bp Length : 3657 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGCCCGCGACTCATTCCCCCATGCCCGCTCGTGCCTGGATAGTTCGCCTTGCCCGCGTGTGTTGGGAACGTAAAACACT GAGCATCATTGTCATCGTAGCATCAGTATCGACCATTTTACTGGCTGCGCTGACGCCGCTAATAACGCGTCAGGCCGTCA ATGACGCGATAGCAGGCGATACGACCCACCTGCCGTTACTTGCCTGCGGCCTGCTGTTAATTGCCCTTTTTGATTTTATC GGGAATTACGTGCGCCGCGGCTATGCCGGGGAACTCTCGTTGTGGGTTCAGCATACGTTACGTAGCCGTGCGTTCGACAG TATTCAAAAACTGGACGGCGCAGGCCAGGACGCCTTACGTACCGGGCAGGTCATTTCGCGTACCAACAGCGATCTTCAAC AGGTACACACCTTGCTACAAATGTGCCCGGTGCCGATGGCGGTACTCACTTACTATGTGGCCGGTATCGCGGTGATGCTA TGGATGTCGCCATCCATGACGCTTATCGTGATTTGCGTACTGGCCGCCCTTGCCATTACCGCCCTGCGCGCCCGTCGCCG TGTTTTCGCGCAAACGGGGCTTGCCTCAGACCGGCTGGCGCACATGACGGAACATATGCGCGAAGTATTGGAACAGATCT CAGTGGTGAAGTCCTGCGTGGCGGAGTTACGCGAAACGCGTTGGCTCGATGGTCAGTCGCGGCAGATGGTGCGGGTACGC ATCGGCGCCGCTATCTCGCAGGCGATGCCGGGCGCAACCATGCTGGCGCTACCGGTGATAGGGCAAATCGTCCTGCTGTG CTATGGCGGCTGGTCGGTAATGAATGGGCGCATCGATCTGGGAACCTTCGTTGCGTTCGCGAGTTTTCTCGCTATGCTGA CCGGCCCCACCCGCGTACTGGCATCGTTTTTGGTTATTGCACAGCGCACACAGGCGTCGGTGGAGCGCGTCTTCGCGCTT ATCGACACGCGTTCTCGCATGGAAGACGGTACTGAGTCGATTGAAGGTCAGATTATCGGGCTGGACGTGGAGAAGATGAG TTTCCACTACGACAACGGTAACCGTATCCTCAATGAGATCTCGTTTTCCATTCACGCCGGTGAAACCGTGGCGGTGGTTG GCGCCTCCGGCTCCGGGAAATCAACGTTGCTGATGTTGCTGGCGCGCTTTTACGATCCCGCCTCCGGCGGGGTGTGGCTC AACACCACTACGGGTCAACAGAATATTCGCGACCTGAAACTGACGGCGCTTCGTCGTCGCGTTGGCGTAGTTTTTGAAGA CGCGTTTCTGTTTGCCGGTACGGTGGCGGAAAACATCGCCTATGGGCACCCGCAAGCGACTCAGGACGACATTCGACGCG CCGCCGATGCCGCAGGCGCCAGCGGGTTCATCAATGCGCTACCGCAGGGGTTCAACACCCGACTGACCGAACGCGGAAGC AACCTCTCCGGTGGCCAACGCCAGCGTATTGCGCTAGCCCGGGCACTGATTACCGCGCCGGAACTGCTGATTCTCGATGA CACCACCTCGGCGGTCGATGCCGGTACTGAAGCGGAAATTAACACGGCTCTTGGTCGTTATGCCGATAATGAGCATATGC TGCTGGTGATTGCACGCCGCCGTTCAACACTGCAGTTAGCCGATCGGATCGTCGTGCTGGATAAAGGCCGCGTCGTGGAT ATCGGTACCCAGGCGGAGCTGGATGCAAGGTGTCCGACGTTTCGCTCGCTGATGAGCGGCGAGGGGGATTTTCTCGCCCT TGCCCCAGCAGAACAACGTACGCTATGGCCAACAACGCAGGCGGTAAAATCCGACGACGCGCATGAGCGCCAGACACCCG CCGGAAAAGGTTTTGTCGACCGGATGACGCGCGTTCCAGAACGCGCCGTACAGATGGCGCTGGCAGGCCACGGGCGTCAA GTCTCATCGCTGCTGACGCCAGTAGCCTGGATGTTCGTCATCGCCGCCCTGCTTATCGCGCTTGATTCCGCCGCAGGCGT TGGCGTGCTGGTGCTTTTGCAGCGCGGTATTGACTCAGGCGTTGCCGCAGGGGATATGTCGACTATTGGCATATGCGCCC TGCTCGCGCTGTGCCTGGTGGCGATCGGTTGGTGCTGCTATGCGCTGCAAACGATCTTCGCCGCCCGCGCGGCAGAGTCG GTACAGCATACGGTACGCTTACGCAGCTTCAGCCACCTGCTACGCCTGAGTCTTCCCTGGCACGAGAAGCACATCGACTC GCGTCTTACTCGCATGACCGTCGACGTTGATTCACTCGCCCGATTTCTGCAAAACGGTCTTGCCAGCGCGGCCACCAGCA TCGTGACGATGGTCGCTATCGCCGCGGCAATGTTCTGGCTTGACCCCATTCTTGCGTTAACGGCATTAAGCGCCGTACCT GTAGTGATACTGGCGACGTGGATTTACCGCCGTTTGAGCTCGCCTGCTTACGCCCAGGCACGGCTGGAAATTGGTAAGGT GAACAGTACGCTTCAGGAAAAGGTCTCCGGTATGCGGGTAGTGCAGTCACACGGTCAACAGAAGCAGGAAGCCGCCAGGC TACGGGCGTTATCAGACAACTTCCGCGCCACCCGCGTGCGGGCGCAAAAATACCTTGCCGTTTATTTTCCGTTCCTGACC TTCTGCACCGAGGCCGCCTATGCCGCCGTGCTTTTAATCGGGGCGACCCGGGTCGCCGGAGGCGAAATGACGCCCGGGAT ACTGGCGGCGTTCTTCCTGCTACTGGGACAATTTTATGGCCCGGTACAGCAGTTGTCAGGCATTGTTGATTCCTGGCAGC AGGCGACCGCCAGCGGCAAACATATCAATGCGCTATTGGCGACTGAGGACACGGAGAATATTGAACCGTCCTCCATAACG CCTGGCACTGGCGGCGCGCTACGTCTGGAGGCATTGACATTCCGCTATCCCGAAAAAACGCAACCTGTGCTTGATAAGCT CTCGCTCACCATTCCGCCAGGAACGGTAGTCGCGGTGGTCGGACGTAGCGGCGCTGGCAAATCGACGCTGATCAAGCTGC TGGCCGGGCTCTACTCTCCCGGCAGCGGGCAAATCCGTGTCGGTGAGCGCCTAATTGATGCCGCGTCGCTTAGTGATTAT CGTCGCCAGACGGGGCTGGTCACTCAGGATGTCGCATTATTTAGCGGCGATATTGCCGAAAATATCCGCTATTCGCGGCC AGACAGCAGCGACACGGAGGTGGAGAGCGCGGCGCGACGGGCGGGACTCTTTGAAACTGTGCAACATCTGCCGCTGGGGT TTCGTACTCCGGTCAATAACGGCGGCACGGATCTGTCCGCGGGCCAGCGTCAGTTGATTGCCCTCGCCCGCGCCCACCTG GCGCAGGCGCATATTCTGCTGCTCGACGAGGCGACAGCGCGTATCGACCGTAGCGCCGAGGAGCGCTTAATGACCTCGCT GACCAGGGTGACGCATACCGAGAAACGCATCGCGCTTATCGTCGCGCACCGGCTGACCACCGCTCGCCGCTGCGATGTGA TTGTCGTAATCGATAAAGGATGTATCGCTGAATATGGCAGCCATGAGCAGTTGATAGCGGCTCATGGCCTGTATGCTCGT CTGTGGCGGAACAGCATCGGCCAGACACGCGATACGCAAGGAGAGGTCATAGGATAG Protein sequence : MPATHSPMPARAWIVRLARVCWERKTLSIIVIVASVSTILLAALTPLITRQAVNDAIAGDTTHLPLLACGLLLIALFDFI GNYVRRGYAGELSLWVQHTLRSRAFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPMAVLTYYVAGIAVML WMSPSMTLIVICVLAALAITALRARRRVFAQTGLASDRLAHMTEHMREVLEQISVVKSCVAELRETRWLDGQSRQMVRVR IGAAISQAMPGATMLALPVIGQIVLLCYGGWSVMNGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFAL IDTRSRMEDGTESIEGQIIGLDVEKMSFHYDNGNRILNEISFSIHAGETVAVVGASGSGKSTLLMLLARFYDPASGGVWL NTTTGQQNIRDLKLTALRRRVGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADAAGASGFINALPQGFNTRLTERGS NLSGGQRQRIALARALITAPELLILDDTTSAVDAGTEAEINTALGRYADNEHMLLVIARRRSTLQLADRIVVLDKGRVVD IGTQAELDARCPTFRSLMSGEGDFLALAPAEQRTLWPTTQAVKSDDAHERQTPAGKGFVDRMTRVPERAVQMALAGHGRQ VSSLLTPVAWMFVIAALLIALDSAAGVGVLVLLQRGIDSGVAAGDMSTIGICALLALCLVAIGWCCYALQTIFAARAAES VQHTVRLRSFSHLLRLSLPWHEKHIDSRLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSAVP VVILATWIYRRLSSPAYAQARLEIGKVNSTLQEKVSGMRVVQSHGQQKQEAARLRALSDNFRATRVRAQKYLAVYFPFLT FCTEAAYAAVLLIGATRVAGGEMTPGILAAFFLLLGQFYGPVQQLSGIVDSWQQATASGKHINALLATEDTENIEPSSIT PGTGGALRLEALTFRYPEKTQPVLDKLSLTIPPGTVVAVVGRSGAGKSTLIKLLAGLYSPGSGQIRVGERLIDAASLSDY RRQTGLVTQDVALFSGDIAENIRYSRPDSSDTEVESAARRAGLFETVQHLPLGFRTPVNNGGTDLSAGQRQLIALARAHL AQAHILLLDEATARIDRSAEERLMTSLTRVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIAAHGLYAR LWRNSIGQTRDTQGEVIG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
iroC | CAC43427.2 | ABC transport protein | Virulence | PAI III 536 | Protein | 0.0 | 80 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SeHA_C2950 | YP_002046732.1 | ATP-binding protein | VFG1653 | Protein | 0.0 | 80 |