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Name : SeHA_C0341 (SeHA_C0341) Accession : YP_002044285.1 Strain : Salmonella enterica SL476 Genome accession: NC_011083 Putative virulence/resistance : Unknown Product : fimbrial protein Function : - COG functional category : - COG ID : - EC number : - Position : 354552 - 355604 bp Length : 1053 bp Strand : + Note : identified by match to protein family HMM PF07434 DNA sequence : ATGACAGCCTATTGGTCAGCAATTATTAATTTCATCCGAAAATATGTTTATCCAGCAAGGATAATTGCCATCCTGCTGAT GGCTGGCGCTACACTGCCACAAGTCGCCGATGCGATTACCGTCGACCTGAATTACGACAAGAACAATGTACCGGTCATCA CTCCTGTCTGGTCCCAAGAATGGAGTGTAGCAAATGTGTTGGGGGGATGGGTATGTCGTTCAAACAGGAATGAAAATGAG GGGGCGTGTGAAGAAACACATTTGGTATGGTGGTATGCTTTTGGAGCTTATTCAAAAATTCGTCTGCGTTTCAGAGAACA AATCAGCCATGCTGAAATCACGCTCATACTGCTCGGCAGTGTTCGTAATGCCTGTTATACTGGTGTCGTGAACATGAACG CTGCTGCATGTCAATGGGGTAGGTCGCTGAAACTTAGGATACCTTCAGAAGAGCTTGCGAAGATACCTACAAGCGGAACA TGGAAAGCAACGTTAGTCCTGGATTATTTACAATGGGGCGGAGACGATCCTTTAGGCACATCAACTACAGATATCACGCT GAATGTAACAGACCACTTTGCAGAAAATGCGGCTATTTACTTTCCGCAGTTTGGTACTGCAACCCCTCGTGTTGACCTGA ATCTTCACCGGCTGAATGCCTCACAAATGTCGGGCAGGGCTAATCTGGATATGTGTCTGTATGACGGAGGTGTGAAAGCC CGTTCATTACAGATGAAGATAGAAGGAAGCAATAAGTCAGGTACGGGATTTCAGGTTATAAAGAGCGATTCTGCTGATAC GATTGATTATGCGGTCAGTATGAATTATGGGGGACGAAGTATTCCTGTCACCCGTGGCGTGGAGTTCAGTCTGGATAACG TGGATAAAGCAGCAACGCGTCCGGTGCTACTTCCCGGGCAACGGCAGGCGGTACGTTGTGTGCCAGTGCCCCTTACCCTG ACAACACAACCCTTTAACATCAGGGAGAAGCGTTCTGGTGAGTATCAGGGAACGCTGACAGTGACAATGCTGATGGGAAC ACAAACCCCCTGA Protein sequence : MTAYWSAIINFIRKYVYPARIIAILLMAGATLPQVADAITVDLNYDKNNVPVITPVWSQEWSVANVLGGWVCRSNRNENE GACEETHLVWWYAFGAYSKIRLRFREQISHAEITLILLGSVRNACYTGVVNMNAAACQWGRSLKLRIPSEELAKIPTSGT WKATLVLDYLQWGGDDPLGTSTTDITLNVTDHFAENAAIYFPQFGTATPRVDLNLHRLNASQMSGRANLDMCLYDGGVKA RSLQMKIEGSNKSGTGFQVIKSDSADTIDYAVSMNYGGRSIPVTRGVEFSLDNVDKAATRPVLLPGQRQAVRCVPVPLTL TTQPFNIREKRSGEYQGTLTVTMLMGTQTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcfD | NP_454915.1 | putative fimbrail protein | Not tested | SPI-6 | Protein | 1e-160 | 99 |
