Gene Information

Name : SeSA_A1152 (SeSA_A1152)
Accession : YP_002114086.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Virulence
Product : secreted effector protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1357
EC number : -
Position : 1135122 - 1135997 bp
Length : 876 bp
Strand : -
Note : identified by match to protein family HMM PF00805

DNA sequence : 
ATGCCAATAACTAACGCGTCCCCAGAAAATATATTAAGATATTTGCATGCGGCCGGTACCGGTACGAAAGAAGCAATGAA
AAGTGCAACTTCACCACGCGGTATACTGGAATGGTTTGTCAATTTTTTTACCTGTGGTGGAGTAAGAAGAAGCAATGAAA
GATGCTTTCGGGAGGTAATTGGAAAACTGACCACATCATTATTATATGTAAATAAAGATGCTTTCTTCGATGGTAATAAA
ATATTTCTGGAGGATGTCAACGGGTGTACTATATGTCTGTCATGTGGAGCAGCATCCGAAAATACGGATCCCATGGTCAT
TATTGAAGTGAACAAAAATGGAAAAACTGTAACGGATAACGTTGATAGTGAGAGATTTTGGAATGTATGTCGAATGTTAA
AGCTGATGAGTAAACATAATATACAACAGCCTGATTCACTTATAACCGAGGATGGTTTTCTGAACCTGCGCGGAGTAAAC
CTGGCTCATAAAGATTTCCAGGGGGAAGATTTGTCAAAAATAGATGCTTCTAATGCAGATTTCCGTGAAACAACTCTTTC
TAATGTAAATTTAGTCGGTGCAAATTTGTGTTGTGCAAATCTACACGCTGTAAATCTAATGGGTTCAAACATGACTAAAG
CAAACCTGACTCACGCAGACCTGACTTGCGCTAACATGTCCGGTGTAAACTTAACCGCTGCAATTCTATTCGGCTCAGAC
TTAACTGACACCAAACTAAATGGTGCAAAATTAGATAAGATAGCTCTAACTTTAGCGAAAGCATTAACAGGAGCCGATCT
GACAGGTAGTCAACATACCCCTACTCCACTCCCGGATTACAATGATAAAACGCTTTTCCCCCATCCAATATTTTAG

Protein sequence : 
MPITNASPENILRYLHAAGTGTKEAMKSATSPRGILEWFVNFFTCGGVRRSNERCFREVIGKLTTSLLYVNKDAFFDGNK
IFLEDVNGCTICLSCGAASENTDPMVIIEVNKNGKTVTDNVDSERFWNVCRMLKLMSKHNIQQPDSLITEDGFLNLRGVN
LAHKDFQGEDLSKIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSD
LTDTKLNGAKLDKIALTLAKALTGADLTGSQHTPTPLPDYNDKTLFPHPIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipB NP_460061.1 secreted effector protein Virulence SPI-5 Protein 2e-130 99
pipB NP_455586.1 conserved hypothetical protein Virulence SPI-5 Protein 2e-130 99
pipB YP_216027.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 2e-129 98
pipB AAC33725.1 PipB Virulence SPI-5 Protein 7e-130 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeSA_A1152 YP_002114086.1 secreted effector protein VFG0589 Protein 1e-130 99