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Name : SeSA_A0236 (SeSA_A0236) Accession : YP_002113235.1 Strain : Salmonella enterica CVM19633 Genome accession: NC_011094 Putative virulence/resistance : Unknown Product : shikimate transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 250369 - 251670 bp Length : 1302 bp Strand : + Note : identified by match to protein family HMM PF00083; match to protein family HMM PF07690 DNA sequence : ATGTCCGGAACGTATAATGCTACTATTCGCCGGGTGGTGATTTCCGCCTGGATAGGAAACTCCATTGAATATTATGATTT TCTATTATACGGCCTGGCAAGCGCGCTGGTATTTGGCCCGCTTTTTTTCCCTGGCGCCAGCCCATTGACTGCAACGTTAT CTTCTTTTGCCAGTTTCGGCGTGGGATTTATTTCCCGGCCGCTGGGCGCGCTATTTTTTGGCAACAGGGGAGATACGCTT GGGCGTAAAAACACGTTATTAATCACGTTAGGTGGGATGGGCGCGGTCACGTTTCTCATCGGTTGCCTGCCTTCTTACGC CAGTATTGGCGCGCTGGCGCCTGCCTTACTGGTTATTCTGCGTTTTCTGCAGGGATTTATGGTTGGAGGCGAATGGGGAG GCGCCATGTTAATGGTCGTGGAATATGCTGCTGGAAAGCACCGGGGGCGGTTAAGCGCGCTATCGCAAACAGGAGGACTC ACGGGACAATTATTGGCGACAGGCGCATTTATAGTCGTGACCCAATTACCGAAGGATGCGTTGTTATTGTGGGGATGGCG TATTCCTTTTCTGCTCAGTGCGCTTTTGGTGCTGCCTGGATTATATATGCGTCATCGTCTGGATGAGACGCCTGTCTTCC GTGCGTTTAAAAAGCAGCAGGCCATTAAGCATATGCAGCAAAAAGAAGAAAGGCCGGTGGTCAAAGTGGTACGAGAACAA TGGCGCAGCATTTTGCTGATTATAATTCTACGTTTTGCGGAAAGCGTTCCCTTTTTTCTTGCCACCGTCTTCGCGGTTTC CTGGGCGACGACGCAGCTTGGGATTGCCAGCCTGACTATTCTGTACATTGTAATGTTCACCTGTCTGCTGGCGTATCCCA TGCACGTGCTATTTGGCATCATGTCGGATCGGCGTGGCTGCCGTCAGGTGTATATTTTCGGCGCGCTTTTTGTCGCGGCA ATGGCTTTTCCCTTTTTCTGGCTACTGGAAAGCCGTTCGCTCATACTGATGACAATGGGCTACGTTTTGCTTATTAACAT TGGTCATAATTCACTGAATGCCGTGCAACCTTCTTTTTTCGCCGGACTGTTTCATCCGCCTGTACGCTACAGCGGTTCAT CAATTGGCGCTCAGTTGGGGGCGGTTGTGGCAGGGGGATTCACGCCGTTTATCGCTAAAGCGTTAAGCGCAGTCTATGAT AACAGTTGGACTTTGGTTGCCGGTTATGTCGTTTTGACGGCGTTGGCTTCGGCATTTGCGGCAAAGATTGCGCCGGAAAC CGTGTTACCGCATTCGCCGTAA Protein sequence : MSGTYNATIRRVVISAWIGNSIEYYDFLLYGLASALVFGPLFFPGASPLTATLSSFASFGVGFISRPLGALFFGNRGDTL GRKNTLLITLGGMGAVTFLIGCLPSYASIGALAPALLVILRFLQGFMVGGEWGGAMLMVVEYAAGKHRGRLSALSQTGGL TGQLLATGAFIVVTQLPKDALLLWGWRIPFLLSALLVLPGLYMRHRLDETPVFRAFKKQQAIKHMQQKEERPVVKVVREQ WRSILLIIILRFAESVPFFLATVFAVSWATTQLGIASLTILYIVMFTCLLAYPMHVLFGIMSDRRGCRQVYIFGALFVAA MAFPFFWLLESRSLILMTMGYVLLINIGHNSLNAVQPSFFAGLFHPPVRYSGSSIGAQLGAVVAGGFTPFIAKALSAVYD NSWTLVAGYVVLTALASAFAAKIAPETVLPHSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 5e-58 | 41 |
