Gene Information

Name : SeSA_A0297 (SeSA_A0297)
Accession : YP_002113283.1
Strain : Salmonella enterica CVM19633
Genome accession: NC_011094
Putative virulence/resistance : Unknown
Product : type VI secretion protein, family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3520
EC number : -
Position : 307730 - 308725 bp
Length : 996 bp
Strand : -
Note : identified by match to protein family HMM PF06996; match to protein family HMM TIGR03347

DNA sequence :
ATGACCGGCGCTCTCGACCAGGCGCAGAAAACCCCATGGCGTTACGGATTCCTGAACCTGATGCGGCGCGTGGATGCCCA
GCTCTGTGATACTCCGGCAGGCAGTATCTGGCAGCCACGGATGGAAAAATTCCGTCTGGGACAGACGCCGACGATGACCT
TTGCGCCACGGGAAATCGCCCAGGTCAGCTGGCTGGATGGACGCCTGCACCTGAGCCTGTACAGCCTCGGACTGTGGGGG
CCAAACGGCCCGTTGCCGCTGCACTATACCGAGCTGGCGCTAAATCGCTCAGAGAGCCGTCACGATCCGACGCTGGTTCA
TTTTTCCAATATTTTTCACCACCGCTGGCTGACGCAGTTCTGGCAGGCATGGCGCAGCGGCCAGTCCGCTGGTGGCGGGC
TGGACAAACCGGAACACGACCGTTTTGCGTTTTATATCGCCAGTCTCAGCGGGCAGGATCTACGGGAAAGCGCCGAAAGC
CCGCTGTCAGATCATGTTCGCCTGGCAGCCTCCGCTCATCTGGTACGCGAATCGCGCAATCCTGACGGGCTGGCCGCCAC
GCTGGCGCACTATTTCAGCGTACCTTTTGCGGTGAAAGAGTTCGCCCTGCACTGGATAACGGTGGCGAACGATGAAATCA
CCCGTCTGGGCACGCCCGCGCAGTCTTCGGTGCTGGGCAACGGGGCGCTTATCGGCCAGGCCGTACCGGATATGCAGTAC
AAATTCCGGCTAATTATCGGCCCGCTCACGCTGGAGGATTACCTGCGTTTTCTGCCCGGCGGCAACAATTTGCCCGTGCT
GACAGAACTGGTGCGTACGTTCATCGGTTTTGAACATTGCTGGGAGATTGAACTGCAGTTAAAGCCTCATGCCGCACCGC
CTGCGGTGATCGGCGGCGCGCAGCAGCTTGGCTGGACGGCCTGGGCAGGTAAAGCCATGCATGACCGTCCGGTGACCGGC
ATGATTTTTGAACCTGAACACGGCTTAACCCACTGA

Protein sequence :
MTGALDQAQKTPWRYGFLNLMRRVDAQLCDTPAGSIWQPRMEKFRLGQTPTMTFAPREIAQVSWLDGRLHLSLYSLGLWG
PNGPLPLHYTELALNRSESRHDPTLVHFSNIFHHRWLTQFWQAWRSGQSAGGGLDKPEHDRFAFYIASLSGQDLRESAES
PLSDHVRLAASAHLVRESRNPDGLAATLAHYFSVPFAVKEFALHWITVANDEITRLGTPAQSSVLGNGALIGQAVPDMQY
KFRLIIGPLTLEDYLRFLPGGNNLPVLTELVRTFIGFEHCWEIELQLKPHAAPPAVIGGAQQLGWTAWAGKAMHDRPVTG
MIFEPEHGLTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0288 NP_454870.1 hypothetical protein Not tested SPI-6 Protein 1e-143 99