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Name : SeSA_A0346 (SeSA_A0346) Accession : YP_002113323.1 Strain : Salmonella enterica CVM19633 Genome accession: NC_011094 Putative virulence/resistance : Virulence Product : CS1 type fimbrial major subunit Function : - COG functional category : - COG ID : - EC number : - Position : 353409 - 353984 bp Length : 576 bp Strand : + Note : identified by match to protein family HMM PF04449 DNA sequence : ATGTATACCGAGTGTACATATATCACTGTAATAAACAACAAAGCAAGGTTATTTTTTATGAACATGAAAACATCTTTTAT TGCCGCAGCTGTGGCATTGGCCACCGTTTATTCTTTTTCTGTTTCTGCGGTTCAGAAGGATATTACCGTCACTGCCAATA TTGACAGTACACTTGAACTGCTGCAGGCCGATGGTTCATCCCTCCCGTCGACTATGAAGCTGGATTTCATGCCGGGTAAG GGCCTGGTCCATAAATCACTCCAGACCCGCCTTTACAGCAACGATCAGACCAAGTCGGTTAATGTAAAACTGTTGAATGC TCCACAACTTATCAACGTCCTGGATCCCACCAAAACCATTGATATGGAAGTGACTCTGGGAGGACGGTCACTGACCACCA CCAATTCTGTACTGGAAGCTAAAACCCTGTTCCCGGACGGAAAAACTGGCGATGCTTCAGCTCCGCTGAACCTGGATATT GGTCAGAAGGCTGGAGCAGCCTTACAAAACCTGCCTGCCGGTGAATACAGCGGATTGGTCAGTCTGGTGATTTCACAGGC CGTCACTGCCGGCTAA Protein sequence : MYTECTYITVINNKARLFFMNMKTSFIAAAVALATVYSFSVSAVQKDITVTANIDSTLELLQADGSSLPSTMKLDFMPGK GLVHKSLQTRLYSNDQTKSVNVKLLNAPQLINVLDPTKTIDMEVTLGGRSLTTTNSVLEAKTLFPDGKTGDASAPLNLDI GQKAGAALQNLPAGEYSGLVSLVISQAVTAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcfB | NP_454913.1 | putative fimbrial subunit | Not tested | SPI-6 | Protein | 8e-83 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeSA_A0346 | YP_002113323.1 | CS1 type fimbrial major subunit | VFG1435 | Protein | 1e-21 | 41 |
