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Name : secD (MADE_1012955) Accession : YP_004427723.2 Strain : Alteromonas macleodii Deep ecotype Genome accession: NC_011138 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2987711 - 2989555 bp Length : 1845 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : GTGCTAAACAAAAACTCTATCTGGAAGGTACTGAGTGCACTCATTGTGGTTGCAATGTGTGCACTTTACGCACTTCCTAA CATTTACGGCGAAGATCATGCCGTACAAATCTCAGCAGGTCGTGATGCTGTGGTAACTAACGCCACGGTAGAGCAAGTAA AGGCCGCGCTAAACGAAAAAAACATCTCGCCGAAGCGTGTTGAGTTTGAGAACGACCAAATTTTGGTTCGCGTTTCTGAT TCAGATACACAGCTAGTAACCCGCGAAACTTTAGAAAAGACGCTTGGTGACGACTACTACGTGGCAATGAACCTTGCCCC AGACACGCCGGAATGGCTAGAAGGGTTAGGTGGCGCACCGATGAAACTTGGTCTTGACCTTCGCGGTGGTGTGCACTTCT TGATGGAAGTGGACATGACGGAAGTTATCACTAAGTCACTGGAAGATGCTGAAAGCGGCTTTCGCACCTCTCTGCGTGAA GAGGGTATTCGTTACCGTGGTGTTAAACAAGTAGACGACCATATCGACATTACCTTCCGCGATGAAGATACGTTAGATAA AGCGGAGTTCTTCCTGCGCAACCAAAGTCGTGACCTAACGTTTAACCAAATTGATGACTTAACCCTTCGCGCTATTTTCG CGGAGAGTAAGCTTCAAGAAATTCGCGACAACGCGGTTAAGCAAAACATCACTATCATTCGTAACCGTGTTAACCAGCTT GGTGTTGCTGAGCCTCTTGTTCAAAAACAAGGCGCTGACCGTATTGTTGTTCAGCTCCCCGGTATTCAAGATACCGCTCG TGCAAAAGAAATTCTAAACGCGACGGCGACCCTAGAATTCCGCATGGTTGATCAGAAAAACGATATTCGCGATGCATTGA ACGGCCGTGTTCCTCCTGGTTCTCAGGTGATTGAAGATCAGCAAGGTATTCCACAGTTACTTGAAAAGCGTATTATGCTT ACTGGTAGCCACATTATTGATGCTAATAGCGGTGTTGATGAATATGGTCTTCCAAATGTAAATATCTCGCTAGACTCTGA AGGCGGTAACAAAATGTCTCGCTCAACCCGCGGCAACATTGGTAAGCCAATGGCAACGGTGTTTATCGAGTACAAATCTA CCGGAGAGCGAAATGACGACGGTAAACTTGTGTTCGAAAAGCATGAGCAAGTTATCTCAGTTGCCACCATTCGTGCGCAG CTTGGTAGTAAGTTCCAAATTACCGGTCTTGATTCTCCAAAAGAAGCTCGTGATTTAGCGTTACTACTTCGCGCGGGTGC ACTTATTGCGCCAATTCAAATTGTTGAAGAGCGCACCGTAGGCCCAAGCTTGGGTAAAGAAAACATCGAGCTAGGTATGC AGGCTATTATCTATGGCCTTGCGGCTGTGCTTGTTTTCATGTTGATTTACTACAAAGCGTTTGGTGTGGTAGCGAACATC GCGCTTATCACTAACCTGGTAATGATTGTAGGCATCATGTCGATGATCCCGGGCGCAACCTTAACGCTTCCAGGTATGGC GGGTATTGTACTTACCGTTGGTATGGCGGTAGATGCTAACGTGCTAATCTTTGAGCGTATTCGTGAAGAGCTTCGCGAAG GGCGCAGTCCGCAGCAAGCTATTCACCACGGGTACGACAGTGCATTCTCAACCATTTTGGATGCGAATATCACTACTTTC ATTGCTGGTTTAATTCTGTTCGCAGTTGGTACCGGCCCAATTAAAGGCTTCTCTATTACGCTAATGATTGGTATCGCAAC TTCAATGTTTACCGCTATTTTGGTTACTCGCGTTATTGTTAACGCAGTATGGGGCGGCAAACGTGTAGAGAAATTAGCGA TTTAA Protein sequence : MLNKNSIWKVLSALIVVAMCALYALPNIYGEDHAVQISAGRDAVVTNATVEQVKAALNEKNISPKRVEFENDQILVRVSD SDTQLVTRETLEKTLGDDYYVAMNLAPDTPEWLEGLGGAPMKLGLDLRGGVHFLMEVDMTEVITKSLEDAESGFRTSLRE EGIRYRGVKQVDDHIDITFRDEDTLDKAEFFLRNQSRDLTFNQIDDLTLRAIFAESKLQEIRDNAVKQNITIIRNRVNQL GVAEPLVQKQGADRIVVQLPGIQDTARAKEILNATATLEFRMVDQKNDIRDALNGRVPPGSQVIEDQQGIPQLLEKRIML TGSHIIDANSGVDEYGLPNVNISLDSEGGNKMSRSTRGNIGKPMATVFIEYKSTGERNDDGKLVFEKHEQVISVATIRAQ LGSKFQITGLDSPKEARDLALLLRAGALIAPIQIVEERTVGPSLGKENIELGMQAIIYGLAAVLVFMLIYYKAFGVVANI ALITNLVMIVGIMSMIPGATLTLPGMAGIVLTVGMAVDANVLIFERIREELREGRSPQQAIHHGYDSAFSTILDANITTF IAGLILFAVGTGPIKGFSITLMIGIATSMFTAILVTRVIVNAVWGGKRVEKLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-118 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-118 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-118 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-118 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-118 | 47 |
