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Name : MADE_1004785 (MADE_1004785) Accession : YP_004426101.1 Strain : Alteromonas macleodii Deep ecotype Genome accession: NC_011138 Putative virulence/resistance : Unknown Product : heme lyase subunit CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1032984 - 1035041 bp Length : 2058 bp Strand : + Note : cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGTGCCTGAAATTGGAAATATCGCGCTAACGTTGGCATTAGTGCTCTCTATATTGTTGGCAGTTTATCCGCTATGGGG TGCTCACCGTAAGCACGAAGCGTTAATGGCAACCGCCAAACCACTGGCAATTGGCTTATTCACCTTCACGCTTATTGCCT ACGTGTGTTTAACGTACGCCTTTGTTACTGACGATTTTAGTGTGGCCTACGTTGCGCAACACTCAAATAGCCGATTGCCC ATTTACTATAAGATTACTGCTGTTTGGGGCGGTCATGAAGGCTCTTTCCTACTGTGGGTATTGATGCTTTCAATCTGGAC CGTGGCAGTAGCAATATTCAGTAAGGGGATACCTCTTGCCATGGTCGCTAGAGTACTGTCGGTATTGGGCATGGTAGGCA TTGGTTTTTACTTATTTATGCTGCTTACCTCAAACCCCTTTGACAGCATGCTACCGTTTTTCCCGGTCGACGGGCGAGAT CTTAATCCGCTGCTGCAAGATTTTGGTATGATTATTCATCCGCCTATGCTCTATATGGGGTACGTAGGCTTTTCTGTTGC CTTTGCGTTCGCTATTTCTGCGTTAATTTCGGGGCAACTAGATTCGACATGGGCGCGGTGGTCTCGTCCTTGGGTGATTG CAGCGTGGGCCTTTTTAACCGTGGGAATTGCCCTAGGTAGCTGGTGGGCATATTACGAACTCGGCTGGGGCGGCTGGTGG TTTTGGGACCCGGTAGAAAACGCATCCTTTATGCCATGGCTTGTAGGCACGGCGCTCATGCATTCGCTGGCAGTGACCGA AAAGCGAAAAGCGTTTAAATCATGGACAGTGCTGCTTGCTATTGCTGCATTTAGTTTGAGTTTACTAGGCACTTTCTTAG TACGTTCCGGAGTTATTGTTTCGGTGCACTCTTTTGCAAGCGATCCTACTCGAGGCTTGTTCATCTTGGGCATATTGATT GTACTTAGCGGTTTTGGGTTGCTGCTTTATGCCATGCGTGCAGCCTCGCTTAAAAGCCCTGGGCGCTACCAAGCGTTTTC TCGAGAAGTGCTGTTAATGGGCAACAATGTCTTTCTGTGCGCAGCAACATTAGTTGTTCTTCTCGGTACGCTACTGCCCC TTGTTCACAAAGAGTTAGGCTTAGGCAGTATTTCTGTAGGCGCGCCGTTCTTTAACCAAATGTTTACGCTTCTCATTGTG CCTTTTGTATTAATGCTGGGTTTAGGTCCACTAACGCGCTGGAAACAGCAAAAAGCCAGCGAACTGCAAAAACAACTATT GGTCGCAGGCGGTATTGCACTAAGTGCAGGTGTACTAGTGAACTTTGCTTACGACGAACCCACTTACATGGGGGTACTGG GCATGGTGCTGGTTTTCTGGATCCTCGTCACCACGGTACAAGAGGTAATGCAGCGCTTAGCGGCTATGCCTTCGTCGAAC ACCGAGAATGCATCAGTAATAGCTAAACTTCGCAAGCTTACGCCAAGTCACTGGGGCATGGTGCTAGGCCATGTGGGCTT TGCTATCTGTATTATTGGCATTACGCTGGTTTCCAATTATGAACTTGAGCGCGACGTACGTATGGATATCGGCGATACCG TCTCGCTGGGTGGCTATGACTTTAGCTTTAGAGATGTACGGAAGGTGGAAGGTCCGAATTTTAATGCAGATAAAGGCATA TTCGATGTTTATAAAAATGGTGAAATGATAGCGCATCTAGAGCCAGAGAAACGTTTGTACATTGTGCAGCGCATGCCCAT GACAGAAGCGGCCATCCACTCAAACTTGGCGCGTGATCTATTCATTGCCATGGGCGAGCCGTTAGACAATGGCGCATGGG CTATTCGTATTTACATTAAACCGTTTGTTATCTGGCTATGGGCGGGTGCGGTTGTTATGGCGATAGGCGGTATTTTTTCT ATTAGTGATAAGCGCTACCGCATGGCGAAAGTGAAAAAGTTGAAACGTGTACTTGGCAGTAAATCTGTAGCTTCAACAGG TACACCAAATACCCACGCCTCTGCCGTGTCACGAGTATCCACAAAAGGAGATGCATAA Protein sequence : MVPEIGNIALTLALVLSILLAVYPLWGAHRKHEALMATAKPLAIGLFTFTLIAYVCLTYAFVTDDFSVAYVAQHSNSRLP IYYKITAVWGGHEGSFLLWVLMLSIWTVAVAIFSKGIPLAMVARVLSVLGMVGIGFYLFMLLTSNPFDSMLPFFPVDGRD LNPLLQDFGMIIHPPMLYMGYVGFSVAFAFAISALISGQLDSTWARWSRPWVIAAWAFLTVGIALGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALMHSLAVTEKRKAFKSWTVLLAIAAFSLSLLGTFLVRSGVIVSVHSFASDPTRGLFILGILI VLSGFGLLLYAMRAASLKSPGRYQAFSREVLLMGNNVFLCAATLVVLLGTLLPLVHKELGLGSISVGAPFFNQMFTLLIV PFVLMLGLGPLTRWKQQKASELQKQLLVAGGIALSAGVLVNFAYDEPTYMGVLGMVLVFWILVTTVQEVMQRLAAMPSSN TENASVIAKLRKLTPSHWGMVLGHVGFAICIIGITLVSNYELERDVRMDIGDTVSLGGYDFSFRDVRKVEGPNFNADKGI FDVYKNGEMIAHLEPEKRLYIVQRMPMTEAAIHSNLARDLFIAMGEPLDNGAWAIRIYIKPFVIWLWAGAVVMAIGGIFS ISDKRYRMAKVKKLKRVLGSKSVASTGTPNTHASAVSRVSTKGDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-150 | 57 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-143 | 54 |
