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Name : SSPA1375 (SSPA1375) Accession : YP_002142214.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Unknown Product : LysM domain Function : - COG functional category : S : Function unknown COG ID : COG1376 EC number : - Position : 1548802 - 1549803 bp Length : 1002 bp Strand : - Note : similar to Salmonella typhimurium LysM domain DNA sequence : ATGAAACGTGCGTCTTTCATTACGCTAACTATTATCGGCGCGTATAGCGCGTTACAGGCAGCCTGGACGGTTGATTATCC ATTACCGCCAGAAGGCAGCCGTCTTATTGGTCAGAATCAAACCTATACCGTACAGGAAGGTGATAAAAACCTGCAGGCTA TCGCCCGGCGTTTTGATACGGCGGCGATGCTCATTCTTGAAGCGAACAATACGATTGCGCCGGTGCCTAAGCCCGGTACG CTAATTACCATTCCCTCGCAGATGCTATTGCCGGATGCGCCCAGGGAAGGCGTTATCGTCAACCTCGCGGAGCTACGGTT GTATTATTACCCGCCGGGAGAAAACCGCGTTCAGGTGTATCCCATCGGCATCGGTTTGCAGGGACTGGAAACTCCCGTCA TGGACACCCGGATAGGGCAAAAGATCCCCAACCCGATGTGGACGCCGACGGCGGGCATACGCCAACGTTCGCTTGAGCGG GGGATCACGCTGCCACCGGTGATCCCTGCCGGGCCAAATAACCCGCTGGGACGCTATGCGCTGCGTCTGGCGCACGGTAA TGGGGAATATCTCATTCATGGCACCAGCGCGCCGGATAGCGTGGGTCTGCGCGTGAGTTCCGGTTGCATTCGCATGAACG CGCCGGACATCAAGGCGTTATTTGCGCAGGTCAGAACGGGGACGCCGGTAAAAGTGATTAACCAGCCGGTGAAATTCTCT GTCGAGCCGAATGGCATTCGTTATGTAGAGGTACACAGGCCGCTATCGCCGGAAGAAGAGCAAAACGTGCAGACGATGCC CTACGTGTTGCCTGCGGAATTTACCGCGTTCAGAAACGCGCAAGGGGTGGATAGTCGCCTGGTCGATAAGGCGCTATACC GGCGAGCCGGGTATCCTGTCAGCGTGAGCGCCGGGCAGACGCCAGCGGTAAATACAACCGCAGTCGAATCCGCTCAGAAC GGTTTTGTCGGGGAAGAGGGGCAAACACGCGCGACGCAGTAG Protein sequence : MKRASFITLTIIGAYSALQAAWTVDYPLPPEGSRLIGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGT LITIPSQMLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPMWTPTAGIRQRSLER GITLPPVIPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFAQVRTGTPVKVINQPVKFS VEPNGIRYVEVHRPLSPEEEQNVQTMPYVLPAEFTAFRNAQGVDSRLVDKALYRRAGYPVSVSAGQTPAVNTTAVESAQN GFVGEEGQTRATQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| erfK | YP_853091.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 8e-53 | 44 |
