|
Name : SSPA2293 (SSPA2293) Accession : YP_002143139.1 Strain : Salmonella enterica AKU12601 Genome accession: NC_011147 Putative virulence/resistance : Virulence Product : fimbrial subunit Function : - COG functional category : - COG ID : - EC number : - Position : 2548274 - 2548849 bp Length : 576 bp Strand : - Note : similar to Salmonella typhi Ty2 fimbrial subunit DNA sequence : ATGTATACCGAGTGTGCATATATCACTGTAATAAACAACAAAGCAAGGTTATTTTTTATGAACATGAAAACATCTTTTAT TGCCGCAGCTGTGGCATTGGCCACCGTTTATTCTTTTTCTGTTTCTGCGGTTCAGAAGGATATTACCGTCACTGCCAATA TTGACAGTACACTTGAACTGCTGCAGGCCGATGGTTCATCCCTCCCGTCGACTATGAAGCTGGATTTCATGCCGGGTAAG GGCCTGGTCCATAAATCACTCCAGACCCGCCTTTACAGCAACGATCAGACCAAGTCGGTTAATGTAAAACTGTTGAATGC TCCACAACTTATCAACGTCCTGGATCCCACCAAAACCATTGATATGGAAGTGACTCTGGGAGGACGGTCACTGACCACCA CCAATTCTGTACTGGAAGCTAAAACCCTGTTCCCGGACGGAAAAACTGGCGATGCTTCAGCTCTGCTGAACCTGGATATT GGTCAGAAGGCTGGAGCAGCCTTACAAAACCTGCCTGCCGGTGAATACAGCGGATTGGTCAGTCTGGTGATTTCACAGGC TGTCACTGCCGGCTAA Protein sequence : MYTECAYITVINNKARLFFMNMKTSFIAAAVALATVYSFSVSAVQKDITVTANIDSTLELLQADGSSLPSTMKLDFMPGK GLVHKSLQTRLYSNDQTKSVNVKLLNAPQLINVLDPTKTIDMEVTLGGRSLTTTNSVLEAKTLFPDGKTGDASALLNLDI GQKAGAALQNLPAGEYSGLVSLVISQAVTAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcfB | NP_454913.1 | putative fimbrial subunit | Not tested | SPI-6 | Protein | 2e-83 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SSPA2293 | YP_002143139.1 | fimbrial subunit | VFG1435 | Protein | 3e-21 | 41 |
