Gene Information

Name : SSPA2298 (SSPA2298)
Accession : YP_002143144.1
Strain : Salmonella enterica AKU12601
Genome accession: NC_011147
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2551748 - 2552692 bp
Length : 945 bp
Strand : -
Note : similar to Salmonella typhi CT18 LysR-family transcriptional regulator SinR

DNA sequence :
ATGGAACTGATCAATAATCGTGGTATGCGAGACTGGATGATATTTATTAAAGTGGCGGAAGTAGGGAATCTTTCCCGGGC
TGCACGGGAATTAGATATTAGCATTTCTGCTGTCAGTAAATCGCTTAGCCGCCTTGAGAATTCTATTGAGGTTACTTTAC
TTCGGCGCGATTCACATCACTTAGAACTGACTGGAGCTGGTCAGACAGCCTATGCAAGCATGAAAAGGATAACATCTTCC
TTTCAGTCCTTGCTGGATGAATTGCGAAATCCGGATAAAATTATCAGAGGGAGTATAAAATTTTCGGCTCCGGCTATTGT
CTGTGAGTTTCTTGCCAATAAGTGGATATGGGAATTTACAGCTAGCTATCCGGATACAAAAATCTACCTGGATTCACGAG
AGCGTAGCGATTTTTTTAGTAAATCCCTGGAGTTTGATGAGCTGGTTTTTAAAAGTGGCATAATCGAAAGTGAGGATCTC
GTGTATCGAAAGATAAGCCCTTTAAAGTTGGTTCTTTGTGCGAGTCCGAAATATATCAGAAAATATGGCAGGATCTCACA
TCCTGGCGATTTGGAAAATCACATTATTGTGGGTCTTCACAACCATGGTCTTTCCGGACCTCTTACTCTTTTCCGTCAAG
ATGAATCATACACTATTAGTGGCGCTGTTAATGTTCATTTATCTTCCAATAATCTTTTGAGTGTTCTTAATTTGGTTTTA
GAAGGAAAGGGTATCAACCTCATGACTCCGGCCTGGCTTGCCACCAAATACTTAAAAAATAATGAACTTGAAATTATACT
TCCTGAATGGAGGGTTCCAGATCTCCCCATTTATCTTGTATGGCGTCATCGTCAGTATTATTCTCCTTTATTTCAACGCT
TTCTGTCTTTTATTGAAGATAAATGGAATAATCGCCCACAAATTGATTTTCTGAATGATGATTAA

Protein sequence :
MELINNRGMRDWMIFIKVAEVGNLSRAARELDISISAVSKSLSRLENSIEVTLLRRDSHHLELTGAGQTAYASMKRITSS
FQSLLDELRNPDKIIRGSIKFSAPAIVCEFLANKWIWEFTASYPDTKIYLDSRERSDFFSKSLEFDELVFKSGIIESEDL
VYRKISPLKLVLCASPKYIRKYGRISHPGDLENHIIVGLHNHGLSGPLTLFRQDESYTISGAVNVHLSSNNLLSVLNLVL
EGKGINLMTPAWLATKYLKNNELEIILPEWRVPDLPIYLVWRHRQYYSPLFQRFLSFIEDKWNNRPQIDFLNDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sinR NP_454910.1 LysR-family transcriptional regulator SinR Not tested SPI-6 Protein 1e-134 99