Gene Information

Name : rnhA (SeAg_B0307)
Accession : YP_002145263.1
Strain : Salmonella enterica SL483
Genome accession: NC_011149
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 312504 - 312971 bp
Length : 468 bp
Strand : -
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids

DNA sequence :
ATGCTTAAACAGGTAGAAATTTTCACCGATGGCTCTTGCCTGGGGAATCCAGGGCCTGGTGGTTATGGCGCTATCTTACG
CTATCGCGGTCATGAAAAAACGTTTAGTGAAGGTTACACGCTGACCACCAATAACCGTATGGAACTGATGGCGGCGATCG
TCGCGCTTGAAGCGTTAAAAGAACATTGCGAAGTGACATTGAGCACCGACAGCCAATATGTGCGGCAAGGAATTACCCAA
TGGATTCATAACTGGAAGAAACGCGGCTGGAAAACTGCGGAAAAGAAACCCGTAAAAAATGTCGATCTGTGGAAACGTCT
CGATGCTGCGTTAGGTCAGCATCAGATCAAATGGGTATGGGTCAAAGGCCATGCAGGCCATCCCGAAAACGAGCGTTGTG
ATGAACTGGCGCGCGCCGCGGCAATGAATCCCACGCAGGAAGATAGTGGCTACCAGGCGGAAGCTTAG

Protein sequence :
MLKQVEIFTDGSCLGNPGPGGYGAILRYRGHEKTFSEGYTLTTNNRMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQ
WIHNWKKRGWKTAEKKPVKNVDLWKRLDAALGQHQIKWVWVKGHAGHPENERCDELARAAAMNPTQEDSGYQAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 4e-53 74