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Name : clpV_1 (VFMJ11_1082) Accession : YP_002155803.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1136375 - 1138957 bp Length : 2583 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03345 DNA sequence : ATGATTAACGTAGAACTACCTCAATTAATTAAAACATTAGATAAAGAGTCACATCTTGCGTTAGAGCAAGCTGCACAATT ATGCGTCACTCGTGGCGGTAATGAAGTGTTATGTGAAGACTTTATTCTTGCGGCACTGAATAATCCACAAAGTTTCTGGA ATAAAGCTTGTCAGCAATACAATGTATCTACTGATGTTTTAATTGAAGCGCTACAACACGGAAGAAAAAGCACCTCATCT GAAAGTAATCACCCCGTTTTATCAACTGCGTTAATTGAATGGCTTCAAGAAAGTTATCTTTTCTCCATGCTAGAAATGCA GCTTTCTGAAGTATTAGCAGCGAACTTACTGCTGACTCTCCTTTCTCATCCAAACAAATATGGGCACACCCCCTATTACC GTGAACTCAGTGTTATTCCTGTCGCTTCATTAAAACAACAGGTTGAAGGCTTAGTCAGCTGCGCGAATCGAGATTCTCAA TCCTCTGCTGAACATCAAAATGCACTCGATGCATACACGACCAATTACACACAATTGGCGAAAGATAATAAAATTGATCC TGTTTTATGCCGAGATTCTGAAATTCGTCAAATGATCGATATTTTAGCCCGTCGCCGTAAAAATAACCCAATGATTGTTG GCGAAGCGGGGGTTGGCAAAACTGCATTAGTAGAAGGTTTAGCAATAAAAATAGCTCAAGGAGAAGTGCCCGATATACTT GAAAATGTCGCCCTTCTCTCTTTGGATCTTGGGTTACTTCAAGCAGGTGCAAGTATTAAAGGTGAATTTGAACGTCGCTT AAATTTGGTTATCACAGCAGTTCAAGAAAGTCCGACACCTATTATCTTATTTATTGATGAAGCACATACTCTAATTGGTG CTGGTGGACAAGCTGGTAGCAATGATGCAGCAAACCTTCTCAAACCAGCTCTTGCTCGAGGTGAATTACGTACAATAGGT GCAACAACGTGGTCTGAATATAAAAAATACATAGAAAAAGATCCAGCACTTGCACGACGTTTCCAACCGGTAAAAGTAGA CGAACCAAATGTTACTCAAGCTGTAACAATTTTACGAGGTCTTGCTGAACGTTATGAGGAAAGCCACGGTGTTTATGTAA GAGATGATGCCATCATTGCCGCCGCTGAATTATCTGCACGTTACATTAGCGGTCGTCAACTACCAGATAAAGCCATCGAT CTTCTTGATACAGCTTGTGCACGTGTGAAGATCAATTTAAAAGCAAAGCCTGAGTCATTAGAAACGTTATTGCATATTAT TGCTATTACTCAACGTGAGCTTGATTGTGTATTAAGAGATCAACAAGCAGGAATTAATATTGAAGAAAACACCATCACTC AATTGAAAGAAAAGCTGTCTCAAACCCACCTTGACGCTGAACAGTTAGAGCAAGAATGGCAAACACAAAAAGAATTAGCC GAAGCGCTACTAACTTCTCGAATTGACATTGCACAATGTAACGATGAAGAAGAAAAGCATCGATTAATTTGCAACCAGCA AGAGATACATCAAGCGCTATCGGATGCACAGCACACACACTCTTTAGTCAATTACGAAACCTGCCCATCTTTGGTTGCTG AAGTAGTATCCCATTGGACAGGCATTCCAATGAGTACACTACAACGTGGACAAGCGACTCAAGTACTTACGATAAAATCA AAGCTAAAAGAGCAAATCAAAGGTCAGGATCAAGCCGTCATCGCCTTAGAAAAAGCAATCCAAGCCACTGCAGCAGGATT AAATAACCCTAATTCTCCAACCGGTGTATTTCTTTTTGTTGGTCCAAGTGGTGTAGGCAAAACTCAAACTGCTCAAGCCA TTGCCGATTTAATGTATGGCGGCGAACAATTTCTCACCACCATCAATATGTCAGAGTTTCAAGAAAAACACACCGTATCT CGTCTAATTGGTTCGCCTCCTGGCTACGTTGGATATGGTGAAGGCGGTGTGTTAACTGAAGCCGTTCGTCAACGCCCTTA TTCCGTTGTATTACTGGATGAAGTAGAAAAAGCAGACCGTGAAATCATGAACCTTTTCTATCAAATTTTTGATAAAGGTG TCGCTAATGATGGTGAAGGAAGAGAAATCAACTTCAAACAAACGCTAATAATCATGACGTCAAACTTAGCCTCTGATCAA ATTGAAGCACTTTGTAACCAAGAAGAAAAGCCGACCACAGATGCATTAACTAAAGCCATCCGTCCAACGTTAAATCAGTA TTTTAAACCCGCCTTAGTCGGACGAATGACCGTTGTCCCATTCTTCCCTCTTGATATGGAAAGTATGGAAGCCCTTGTAG ATATTCGCCTTAAACAATTAACCGAACAGCTGTCATTGCAACAAATCACTCTTCATTATGACGAAGCAATCATTCAACAC ATTGCTCAAAGTTGTACATTAACTGAAACCGGTGCGAGAAATATTGATGCCATTATTAATGGACAACTAAAACCTGCATT TTCATCCCAAATACTGCTAGCACTGGCTAGAAAAGAACCATTGACCAGTATATCTCTATGTATCGATGAAAATGGCCAAG TCTTTTGCGAGTTTGAGGACTAG Protein sequence : MINVELPQLIKTLDKESHLALEQAAQLCVTRGGNEVLCEDFILAALNNPQSFWNKACQQYNVSTDVLIEALQHGRKSTSS ESNHPVLSTALIEWLQESYLFSMLEMQLSEVLAANLLLTLLSHPNKYGHTPYYRELSVIPVASLKQQVEGLVSCANRDSQ SSAEHQNALDAYTTNYTQLAKDNKIDPVLCRDSEIRQMIDILARRRKNNPMIVGEAGVGKTALVEGLAIKIAQGEVPDIL ENVALLSLDLGLLQAGASIKGEFERRLNLVITAVQESPTPIILFIDEAHTLIGAGGQAGSNDAANLLKPALARGELRTIG ATTWSEYKKYIEKDPALARRFQPVKVDEPNVTQAVTILRGLAERYEESHGVYVRDDAIIAAAELSARYISGRQLPDKAID LLDTACARVKINLKAKPESLETLLHIIAITQRELDCVLRDQQAGINIEENTITQLKEKLSQTHLDAEQLEQEWQTQKELA EALLTSRIDIAQCNDEEEKHRLICNQQEIHQALSDAQHTHSLVNYETCPSLVAEVVSHWTGIPMSTLQRGQATQVLTIKS KLKEQIKGQDQAVIALEKAIQATAAGLNNPNSPTGVFLFVGPSGVGKTQTAQAIADLMYGGEQFLTTINMSEFQEKHTVS RLIGSPPGYVGYGEGGVLTEAVRQRPYSVVLLDEVEKADREIMNLFYQIFDKGVANDGEGREINFKQTLIIMTSNLASDQ IEALCNQEEKPTTDALTKAIRPTLNQYFKPALVGRMTVVPFFPLDMESMEALVDIRLKQLTEQLSLQQITLHYDEAIIQH IAQSCTLTETGARNIDAIINGQLKPAFSSQILLALARKEPLTSISLCIDENGQVFCEFED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-130 | 47 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-144 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-144 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV_1 | YP_002155803.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 9e-140 | 47 |
| clpV_1 | YP_002155803.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 3e-153 | 46 |
