Gene Information

Name : VFMJ11_1768 (VFMJ11_1768)
Accession : YP_002156469.1
Strain :
Genome accession: NC_011184
Putative virulence/resistance : Unknown
Product : nucleoid-associated protein NdpA
Function : -
COG functional category : R : General function prediction only
COG ID : COG3081
EC number : -
Position : 1881414 - 1882472 bp
Length : 1059 bp
Strand : -
Note : identified by match to protein family HMM PF04245

DNA sequence :
ATGATAACCTACTATGTACGTCAACTAAAAACCTTTTCTATTATGAGTTTAACCCTTTCAAACGTAATTTTACATAAATT
AGTAAAAAATGAGCAAGATGAACTTGAAGTTTGTCTAAGAAATCAAACTCTTGAGAACGAAGAGTTCACAGAAGCCCTTG
TTTCTGAGTTACATCGTGTATTTAATTCAAAAGCGGGTAAAGGCTTCGGTGTTTTCAAAACTGAAAGTGAGTTTGGTCAT
TGGTTATCATCTGTTCGCAAGAACGAAACGCCTTTTTTAGAGTTTAGCAACAATTCAGCAGAGAAATTAAAATCTGAGCT
GATTAAGTACCCATTTGCAGAAGAAGGTATTTTAGTTATTGCTGAATACCAATCATTGGCTACTGAATATCTGTTTGTTG
CGGTATTACCATCAAATGAAAGTATGAAAGTTACTGAGCAACTAGATATTAGTGCGACTGATTACCTTGATATTGCAAAA
ATGGACATTGCTGCACGTATCGATTTATCAACTTGGGAAACAGATTCAGATTCAAATCGTTACCTGACTTTCATTAAAGG
TCGTGTTGGTCGTAAAGTTTCTGATTTCTTCTTAGATTTCTTGCAAGCTGATGTTGGTATGGATACTAAGGTTCAAAACC
AAGTATTAATGCAAGCTGTTGAAGATTTTTGTGCTGATGAACGTTTAGATAAAGAAGAAAAACAACAATATCGTAAACAA
GTTTATGATTACTGTAATGGTCAACTGCAAGCGGGTGAAGAATTAACAGTTAAAGAATTGGCTAGTGAATTACCAACGTC
TGAATCTGGTTCTAATTTCTATCAATTTGCAGAAGAGCAAGGATATGAATTAGAAGAGTCTTTCCCTGTTGATCGTACCG
CATTACGTAAATTAACAAAATTTGTTGGAGCTGGCGGTGGTTTATCATTAAATTTTGATGCAATGTTGCTTGGTGAGCGT
GTTTTTTATGATCCAGAAACGGATACGCTAACAATCAAGGGCACACCGCCAAACCTTAAAGATCAATTAACGCGTCGATT
AGGTTCTTCTGAATCATAA

Protein sequence :
MITYYVRQLKTFSIMSLTLSNVILHKLVKNEQDELEVCLRNQTLENEEFTEALVSELHRVFNSKAGKGFGVFKTESEFGH
WLSSVRKNETPFLEFSNNSAEKLKSELIKYPFAEEGILVIAEYQSLATEYLFVAVLPSNESMKVTEQLDISATDYLDIAK
MDIAARIDLSTWETDSDSNRYLTFIKGRVGRKVSDFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLDKEEKQQYRKQ
VYDYCNGQLQAGEELTVKELASELPTSESGSNFYQFAEEQGYELEESFPVDRTALRKLTKFVGAGGGLSLNFDAMLLGER
VFYDPETDTLTIKGTPPNLKDQLTRRLGSSES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01050 YP_001437154.1 nucleoid-associated protein NdpA Not tested Not named Protein 5e-97 57