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Name : ccmF_2 (VFMJ11_1952) Accession : YP_002156646.1 Strain : Genome accession: NC_011184 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2080201 - 2082159 bp Length : 1959 bp Strand : - Note : identified by match to protein family HMM PF01578; match to protein family HMM TIGR00353 DNA sequence : ATGATCGCAGAACTTGGTCACTTTGCAATGATTGCTTCATTAGGGCTTGCGGTCCTTTTGAGCATATTACCTATGTATGG CGCAAGCCGTGGTAATAAGGCATTAATGCAGAGTGCGAGACCATTAGCTTGGGGGATGTTTTTACTCCTAAGTTTATCAT TTGGAATTTTAATGTGGGCATTCTACGTTAATGATTTCACTCTTCAGTATGTAGCAAGTAACTCAAACAGCTTATTACCT TGGTACTATCGTTTAACCGCGGTTTGGGGGGCGCATGAAGGCTCACTATTACTTTGGGTATTAATTCAAGCTGGTTGGAC TGTTGCTGTAGCGACATTCAGTCGTGGCATGCCACAAGAATCTGTTGCACGTGTATTAGCTGTAATGGGGTGGATAACCG TTGGTTTCTTACTGTTTATTATTTTAACGTCTAACCCATTCTTACGTACTTTACCTTATTTCCCAATTGATGGTCGTGAC TTAAACCCGCTGCTTCAAGATCCAGGTTTAATTATTCACCCTCCAATGCTTTACATGGGGTATGTTGGTTTCTCTGTTGC ATTCTCTTTTGCAATTGCTTCATTAATGACAGGGCGTTTAGATACCGCTTGGGCTCGTTGGTCTCGTCCTTGGACTATCG CTGCATGGTCATTCCTAACGGTAGGTATCTCTCTAGGTTCTTGGTGGGCGTACTATGAACTTGGCTGGGGCGGCTGGTGG TTCTGGGATCCAGTAGAAAACGCATCATTTATGCCTTGGCTTGTTGGTACTGCATTAATGCACTCATTAGCAGTAACAGA AAAGCGCGGTACGTTTAAAGCGTGGACAGTATTACTGGCAATTTCAGCGTTCTCATTAAGCTTATTAGGCACATTCTTAG TTCGTTCTGGTATTTTAGTATCAGTTCACGCCTTTGCATCAGATCCTTCTCGAGGCATGTTTATCCTTGGCTTCTTGGTG ATGGTTATTGGTGGTTCATTGTTACTGTTTGCTCTAAAAGGTGCATCAGTTCGTGTTCGAGGTAACTTCTCACTGTTCTC TCGTGAGAATGCGTTATTAGCAAATAACATTTTATTAGTTACAGCATTAGTTGTCGTACTTGTTGGTACTTTATTACCAC TAGTCCATAAGCAACTAGGCTTAGGCTCAGTTTCAATTGGTGCTCCATTCTTCGACATGCTATTTGCATGGTTGATGATC CCATTTGCTTTCCTATTGGGTATTGGTCCACTGATTCGTTGGAAGAAAGACAAACTAAGCAACCTATCAAAACGTCTTGT GATTTCAGGTGCGATAACTGTACCGCTTGCAGCGTTAATGATGGTGATGTTTGCAGATAAATTCCAATTCATGCCTTATT TAGGCTGGATGATGGCGATTTGGATTGTGATTTTACATGGATTTGAGCTGTATGAACGTGCGACGCACCGTCACTCATTC TCTGTGGGTATTACTAAGCTAGGACGCAGTCACTGGGCGATGATTTTTGCTCATATTGGTCTTGCCATTACGATTATCGG TATTGCCATGGTGCAGAACTACAGTATCGAAAAAGACGTACGTTTAGCGCCGGGCGAGCACATTGAAATGAATGGCTACC AGTTCTATTTTGCAGGTGTTAGAGATACAGATGGCCCTAACTATGATGGGTATACCGCTGATTTTGACATCACACTAGAT GGTAAAGCGATTAATACACTGCACGCAGAAAAACGTTTTTATGAAACTGCAGGTTCAATGATGACAGAAGCAGCAATTGA TCGTGGTTTTACTCGTGACTTATACATTGCAATGGGTGAGCGTTTAGATGACAACCGTTCATGGGCTGTACGTATTTACT ACAAACCATTCGTTCGTTGGATCTGGGCTGGTTCATTGTTTATGGCATTTGGTGGTGCATTAGCTATGTCTGATAAACGC TACCGTTTCCGTAAAAATGCTAAAAAACAGGAAGCTTAA Protein sequence : MIAELGHFAMIASLGLAVLLSILPMYGASRGNKALMQSARPLAWGMFLLLSLSFGILMWAFYVNDFTLQYVASNSNSLLP WYYRLTAVWGAHEGSLLLWVLIQAGWTVAVATFSRGMPQESVARVLAVMGWITVGFLLFIILTSNPFLRTLPYFPIDGRD LNPLLQDPGLIIHPPMLYMGYVGFSVAFSFAIASLMTGRLDTAWARWSRPWTIAAWSFLTVGISLGSWWAYYELGWGGWW FWDPVENASFMPWLVGTALMHSLAVTEKRGTFKAWTVLLAISAFSLSLLGTFLVRSGILVSVHAFASDPSRGMFILGFLV MVIGGSLLLFALKGASVRVRGNFSLFSRENALLANNILLVTALVVVLVGTLLPLVHKQLGLGSVSIGAPFFDMLFAWLMI PFAFLLGIGPLIRWKKDKLSNLSKRLVISGAITVPLAALMMVMFADKFQFMPYLGWMMAIWIVILHGFELYERATHRHSF SVGITKLGRSHWAMIFAHIGLAITIIGIAMVQNYSIEKDVRLAPGEHIEMNGYQFYFAGVRDTDGPNYDGYTADFDITLD GKAINTLHAEKRFYETAGSMMTEAAIDRGFTRDLYIAMGERLDDNRSWAVRIYYKPFVRWIWAGSLFMAFGGALAMSDKR YRFRKNAKKQEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 5e-156 | 61 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-142 | 53 |
