Gene Information

Name : lolD (VFMJ11_A0512)
Accession : YP_002158061.1
Strain :
Genome accession: NC_011186
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 583291 - 584007 bp
Length : 717 bp
Strand : +
Note : identified by match to protein family HMM PF00005; match to protein family HMM TIGR02211

DNA sequence : 
ATGAGTAATCCATTATTAGTTTGTCAGGGTATCCGTAAGGTTTACCAAGAAGGCGCGATGGAAACTGAAGTGCTTAAAGG
CGTGGACTTCCAAATTAATGAAAGTGAGTTAGTGGCGATTGTTGGCTCATCAGGTTCTGGTAAAAGTACACTGCTTCATA
TCTTAGGCGCGTTGGATGAACCAACGGCAGGTACGGTGCATTTCCAAGAGAATGAACTGACGAAGTTGAGTGCTAATAAA
CAAGCTAAAATTCGTAATCAGCATATTGGTTTTGTTTATCAATTTCACCATCTGCTTGCTGATTTTAGTGCACTAGAAAA
CGTAGCGATGCCATTACTTATTGGTGGAGTAAATAAGAAAGAAGCTGCGAAACGTGCCACTGAATTACTGGAAAAAGTAG
GGTTAGCCCACCGTATTGAACACCGCCCGTCAGAGTTGTCTGGTGGTGAGCGTCAGCGTGTTGCGATTGCTAGAGCCTTG
GTGAATAAGCCGGCTTTAGTATTAGCGGATGAACCAACAGGTAATCTAGATCATAAAACGGCATTAGATATTTATAATTT
AATGCGTGAGCTTAACCAAGAATCAGGCACGGCGTTTTTAGTTGTCACTCACGATAATGAATTAGCCGCAAAATTGGATA
AGCAACTAAGTATGCAAGATGGTCGCTTTATCACAGAAGCCGTGCGTTCAAGTTTAGCTCAAGAGATGGAGGCGTAA

Protein sequence : 
MSNPLLVCQGIRKVYQEGAMETEVLKGVDFQINESELVAIVGSSGSGKSTLLHILGALDEPTAGTVHFQENELTKLSANK
QAKIRNQHIGFVYQFHHLLADFSALENVAMPLLIGGVNKKEAAKRATELLEKVGLAHRIEHRPSELSGGERQRVAIARAL
VNKPALVLADEPTGNLDHKTALDIYNLMRELNQESGTAFLVVTHDNELAAKLDKQLSMQDGRFITEAVRSSLAQEMEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_002158061.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 1e-44 48
lolD YP_002158061.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 9e-40 47