Gene Information

Name : VFMJ11_A0822 (VFMJ11_A0822)
Accession : YP_002158371.1
Strain :
Genome accession: NC_011186
Putative virulence/resistance : Virulence
Product : type VI secretion protein, EvpB/family
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 906575 - 908053 bp
Length : 1479 bp
Strand : -
Note : identified by match to protein family HMM PF05943; match to protein family HMM TIGR03355

DNA sequence :
ATGACAGCAGAAGCACAAGCTCCAGAGCAAGAAGCAGCAATCGTTGAGTCTGGTTCATTACTAGATAGTATTCTTAATGA
AACTCGTTTAAAACCAAGTGATGAAGGTTTTGATGTTGCTAAGCGCGGCGTAGAAGCGTTCATTGGTGAGTTACTAAGTA
CAAATACATCAGATAAAGTCGACCAGTCGCTAGTTGATTTAATGATTTCTGAAATTGATCAGAAATTATCAAAGCAAGTT
GATGCAATTTTACATAATGAAGAAGTTCAAGCAATTGAATCAACTTGGCGTGGCCTAAAGTACTTGGTCGATCATACTGA
TTTCCGTGAAAATATTCAGATTGAATTGATTTCAGCGAAAAAAGATGAAGTCTTAGATGATTTTGAAGATGCTCCAGAAG
TAGTTAAATCTGGCCTTTATAAGCAAATTTATACTCGTGAATACGGTCAATTTGGTGGTAAACCTGTTGGTGCAGTTATT
TGTGACTTCCAAATGTCAGCATCATCTCCTGATATTAAACTAATGGAATACATGGCTAACGTTGGTGCAATGTCACATGC
CCCATTTATTACGTCAGCGTCGGCTAAATTCTTCGGACTAGACAGTTATGAAGAATTACCAAACTTAAAAGATCTTAAGT
CTGTATTTGAAGGCCCACAATACACGAAATGGCGTGGATTCCGTGAACATGAAGATGCACGTTATGTTGGTCTTTGTACT
TCTCGTATGATGCTTCGTACTCCTTACTCAGTAGAAGATAATCCAATCAAAGCATTTGATTATAATGAACACGTAAAAGA
TGGTCATGATAACTATTTATGGGGTAATTCAGCTTACGCAATGGCATCTAAGATCAGTGAATCTTTTGCTAAGTATCGTT
GGTGTCCAAACATCATTGGTCCACAAAGTGGCGGTACCGTATCTGATCTTCCAGTATATAACTACGAGTCAATGGGACAA
ATTGAAACTAAGATCCCAACAGAGATCTTAATTTCAGACCGTCGTGAATACGAGCTAGCAGAAGAGGGTTTTATTGCGCT
TACTATGCGTAAAGGTTCTGATAATGCAGCATTCTTCTCTGCAAACTCGGTACAAAAAGCAAAAGTATTCCCGAATACGC
CAGAAGGTCAGCAAGCTGAAATGAACTATAAATTAGGTATTCAATTACCTTACATGTTCATTATTAACCGTTTAGCACAC
TACATTAAAGTGCTTCAACGTGAACAGATTGGTTCATGGAAAGAACGTTCTGATTTAGAAATCGAGCTAAACAAATGGAT
CCGTCAATACGTTTCTGATCAAGAGAATCCGCCAGCAGAAGTACGTGGTCGTCGACCTCTACGTGCTGCAAAAGTGGAAG
TATCTGAAGTTGAAGGCGATCCAGGTTGGTACAAAGTATCAATGTCAGTTCGTCCACACTTTAAGTACATGGGGGCGAGT
TTTGATTTATCTCTAGTTGGAAAATTGGATCAAAACTAA

Protein sequence :
MTAEAQAPEQEAAIVESGSLLDSILNETRLKPSDEGFDVAKRGVEAFIGELLSTNTSDKVDQSLVDLMISEIDQKLSKQV
DAILHNEEVQAIESTWRGLKYLVDHTDFRENIQIELISAKKDEVLDDFEDAPEVVKSGLYKQIYTREYGQFGGKPVGAVI
CDFQMSASSPDIKLMEYMANVGAMSHAPFITSASAKFFGLDSYEELPNLKDLKSVFEGPQYTKWRGFREHEDARYVGLCT
SRMMLRTPYSVEDNPIKAFDYNEHVKDGHDNYLWGNSAYAMASKISESFAKYRWCPNIIGPQSGGTVSDLPVYNYESMGQ
IETKIPTEILISDRREYELAEEGFIALTMRKGSDNAAFFSANSVQKAKVFPNTPEGQQAEMNYKLGIQLPYMFIINRLAH
YIKVLQREQIGSWKERSDLEIELNKWIRQYVSDQENPPAEVRGRRPLRAAKVEVSEVEGDPGWYKVSMSVRPHFKYMGAS
FDLSLVGKLDQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-161 61
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 5e-161 61
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 8e-157 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VFMJ11_A0822 YP_002158371.1 type VI secretion protein, EvpB/family VFG2093 Protein 9e-174 66
VFMJ11_A0822 YP_002158371.1 type VI secretion protein, EvpB/family VFG2475 Protein 6e-162 58
VFMJ11_A0822 YP_002158371.1 type VI secretion protein, EvpB/family VFG2070 Protein 2e-80 41