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Name : clpV_2 (VFMJ11_A0832) Accession : YP_002158381.1 Strain : Genome accession: NC_011186 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 919176 - 921842 bp Length : 2667 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03345 DNA sequence : ATGATAAATATAAATCTCTCTTCTTTAATACAACGTCTACACCCTATTACAAAGGTAGCTCTTGAAGATGCAGCTGCATT AGCTGTTTCTGAACGTGCATCTGAAGTACAAATCGAACACTTTTTATTAAGCTTGCTTGAACGCCCAAATAGCGATTTTG ACCAACTACTCGCTCATTTTGAATGTTCTGAAAACTTATTGCGCCAAGCAATCAAATCAACGCTAGAAAACAGTCATAAA AGCAATGGTGGCAAACCAGTATTTTCAGCAATGCTAATTGAATGGTTACAAGAAGCATGGTTAGTTTCATCACTTGACTT ATCAGAAACTCAAATTCGCTCTGGTGCATTACTGCTTACATTAATTAGCAATCCATTAAGATATGGTCAACATGGTTACT CTTCTCTGTTGGAGAACATCAACCCAGAAACACTGAAACGTAACTTTGCTGAATTAACATCACGTTCAATTGAATCTCAA GTCGCTACATCAGAACAAACTCATGCTCGCGAAGACGGGTCAGCATTAAGTAAATTCACAACAGACTTTACTGGCAAAGC ACGTAAAGGGGAAATTGACCCAGTATTCTGTCGTGACCAAGAAATTCGACAAATCATTGATATCCTAGCGCGTCGACGTA AAAACAACCCTATCGCGGTTGGTGAACCAGGCGTTGGTAAAACAGCCGTAGTTGAAGGTTTAGCACTTAAAATTGTTCAA GGCGAAGTTCCTGATTGCTTAAAAGGTGTTGAGCTTTACGGTTTAGACATGGGATTACTTCAAGCAGGCGCAAGCGTAAA AGGTGAATTTGAAAAACGCCTAAACGCTGTGTTAGACGAAGTTAAGAATTCTCCAACCCCAATTATTCTTTTTATTGATG AAGCACATACGCTTGTCGGTGGCGGTAATCAAGCTGGTGGTAGTGATGCCGCTAACTTATTGAAACCAGCGCTTGCTCGC GGTGAAGTAAAAACCATTGCAGCAACAACTTGGTCAGAGTATAAAAAATATTTTGAAAAAGACCCTGCTTTAGCACGTCG ATTCCAATTAGTTAAACTGGATGAGCCATCAACTGAACAAGCCGCTTTAATCATTCGTGGTCTGCGCGCCGTTTATGAAA AATCACACAATGTTTATGTCCGTGATGATGCAATTACTGCTGCGGCAACCCTATCTGACCGTTATATTTCTGGTCGCCAA CTACCAGATAAAGCCATTGATGTATTAGATACAGCATGTGCTCGTGTAAACATCAGTTTAAACGCCATTCCTGCCCCAAT CGAAACGTTACAACAAGAAATTGCAGCTCTAGAGCGTGAACTTGAAGCATTAGAGCGAGATCAGTTACAGCAAACAGGTG ATCGCCATGCCCTTGCTGCAATTCCAGAATTAAAAGCTCGTATGGATGAAGCGTTGGAAGAACAATCAATACTTCAACAT CAGTGGAAAAAAGAGCAAGCTCTAATTAATGAAATGATTGAGTTACGTGCACACTTGCATGATCTAACATTAGGTACACC TTCTAATGAAGACGTTGATGATGAAGATAACCAAGACAAGCCTGCATGCTCTCAATTTACAGAGGAAGAAACGCGTCAAG CAATTCATACTTGTAACGAACAACTAGAGGCTGCACGTGGTAATAGCCCTCTTGTTCACTTTGAGGTAGGTCCTGATGAA ATCAGTCATGTTATTTCAGATTGGACAGGCATTCCTATGGGCAAAATGCTACAAGATGAAGCAGAAACAACATTAAATCT AGTATCGTCATTAACTGAGAGCATTAAAGGTCAGCCTTATGCTATTGAAGCTTTAGCTGAAGGATTACAAACAGCGAAAG CTGGATTGGTTAATCCAGATGCACCAACCGGTGTATTCTTACTTGTTGGTCCAAGTGGTGTTGGTAAAACTGAAACTGCA CGAGCAATTGCAGATCAAATGTTTGGTGGCGAACGCTTCATGACGACCATTAACATGTCAGAATTCCAAGAAAAACATAC GGTTTCACGTTTAATTGGTTCACCTCCAGGTTATGTAGGTTATGGCGAAGGTGGTATGTTAACGGAAGCAGTACGTCAAC GTCCTTATTCTGTTGTTCTACTGGATGAAGTTGAAAAAGCAGATCCAGAAGTATTGAATTTATTCTACCAAGTATTTGAT AAAGGCACATTAAATGACGGTGAAGGTCGAACTATCGACTTTAAGAACACCTTAATCATTATGACAAGTAACCTTGCTAC TCATGAAATTGAATCTTTAGTACAACAATCGAAAGATATCGATGCAAATATTGTTGCTGAGGCCATTCGCCCAACGTTAA ACAGCCACTTTAAGCCAGCATTACTAGCTCGTATGAACGTATTACCATTCTTACCTCTAAATGATGAAGCAATGACTGAT ATCATCATTCATAAGCTAAATAAAGTATCTAAACGCTTAGAGAAGCACCATAAGTTAACCCTAAGCTACAACGATGAACT AGTGTCATTCATTCTTGCTAATTGTCGACTTGCGGAAACTGGTGCTCGTAATATTGATGCTGTAATTAACCGTCAGCTAT TACCTCAACTTTCAACTCAATTATTAGCACACGATAAAGATGATACACATACTCAAATCGTGATTTCAATTGATGAGCAA GGAACACTAGGTTATGTCTTTAGCTAA Protein sequence : MININLSSLIQRLHPITKVALEDAAALAVSERASEVQIEHFLLSLLERPNSDFDQLLAHFECSENLLRQAIKSTLENSHK SNGGKPVFSAMLIEWLQEAWLVSSLDLSETQIRSGALLLTLISNPLRYGQHGYSSLLENINPETLKRNFAELTSRSIESQ VATSEQTHAREDGSALSKFTTDFTGKARKGEIDPVFCRDQEIRQIIDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVQ GEVPDCLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSPTPIILFIDEAHTLVGGGNQAGGSDAANLLKPALAR GEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSTEQAALIIRGLRAVYEKSHNVYVRDDAITAAATLSDRYISGRQ LPDKAIDVLDTACARVNISLNAIPAPIETLQQEIAALERELEALERDQLQQTGDRHALAAIPELKARMDEALEEQSILQH QWKKEQALINEMIELRAHLHDLTLGTPSNEDVDDEDNQDKPACSQFTEEETRQAIHTCNEQLEAARGNSPLVHFEVGPDE ISHVISDWTGIPMGKMLQDEAETTLNLVSSLTESIKGQPYAIEALAEGLQTAKAGLVNPDAPTGVFLLVGPSGVGKTETA RAIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQVFD KGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVQQSKDIDANIVAEAIRPTLNSHFKPALLARMNVLPFLPLNDEAMTD IIIHKLNKVSKRLEKHHKLTLSYNDELVSFILANCRLAETGARNIDAVINRQLLPQLSTQLLAHDKDDTHTQIVISIDEQ GTLGYVFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-180 | 49 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-180 | 49 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-143 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV_2 | YP_002158381.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 0.0 | 50 |
| clpV_2 | YP_002158381.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 6e-165 | 44 |
