Gene Information

Name : VFMJ11_A0875 (VFMJ11_A0875)
Accession : YP_002158423.1
Strain :
Genome accession: NC_011186
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 974822 - 975766 bp
Length : 945 bp
Strand : +
Note : identified by match to protein family HMM PF04463; match to protein family HMM PF08349

DNA sequence : 
ATGACTATTAATGTTGGCATCAGTTCTTGTGTTATCGGAGAAAGTGTTCGTTTTGATGGCGGGCACAAGAGCAATAAATT
CGCATCAAAAGTATTATCACCATATTTTAATTACATACCAATCTGCCCAGAAGTAGGCAGCGGTATGTCTGTACCACGAC
CAACCATCAGATTAATGACAAACGATGAACGCATCGCCTTAGTTGATTCTAAGGATTCAAGTATTGATTACACGGATTCC
ATGCTTGAATTCTCAAATAAAACCGTTGATGCCCTGATGGATGCAGAGCTATGTGGCTACATTGTCTGTGCCAATTCACC
AAGTTGTGGCATGGAACGCGTTAAAGTTTACAGTAAGAACAATGCAACCAAAAATGGCGTTGGCTTGTATACCGGAACGC
TAATGAAAAAAATGCCGTGGTTACCTGTTGAAGAAGACGGTCGATTAAATGATCCCGTTTTAAAAGAAAACTTCATTACA
CGTGTTTTTTGCTTACACGATTTGTATCAGTCTATGGATGGACAGCCTACCGCAGGAAAAATTGTCGCTTTCCATTCTCG
TTATAAATACACATTAATGTCCCACTCGACTGTCGGCTATAAAAACCTTGGTAAATTAGTGGCTCGTGTTGCTGAATACG
ATATTCACGAATTTTTCAATCTATACCGAACTCAGCTAATGCAAACCATGAGTATTCGAGCTACCCGTAAAAATAACACC
AACGTATTAATGCACTTACAAGGTTATTTCAAGAAAGATTTAGATTCACCTCAGAAGCAGGCTTTAGCTGAGCTCATTCA
AGAGTATAATCAAGGTTTATTGCCTTTATTGTCTCCTATCACTTTGATTAAACACCATTTAAGTATGCACAATAATGATT
ACTTAAAACAACAATCTTTCTTAAACCCTTACCCACAAGAGCTAAGATTACGCTATGGATTATAA

Protein sequence : 
MTINVGISSCVIGESVRFDGGHKSNKFASKVLSPYFNYIPICPEVGSGMSVPRPTIRLMTNDERIALVDSKDSSIDYTDS
MLEFSNKTVDALMDAELCGYIVCANSPSCGMERVKVYSKNNATKNGVGLYTGTLMKKMPWLPVEEDGRLNDPVLKENFIT
RVFCLHDLYQSMDGQPTAGKIVAFHSRYKYTLMSHSTVGYKNLGKLVARVAEYDIHEFFNLYRTQLMQTMSIRATRKNNT
NVLMHLQGYFKKDLDSPQKQALAELIQEYNQGLLPLLSPITLIKHHLSMHNNDYLKQQSFLNPYPQELRLRYGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 4e-76 48
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 3e-76 48
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 3e-76 48
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-76 48
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 4e-76 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VFMJ11_A0875 YP_002158423.1 hypothetical protein VFG0490 Protein 1e-76 48