Gene Information

Name : SeD_A2388 (SeD_A2388)
Accession : YP_002216137.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : propanediol utilization: propanol dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1454
EC number : -
Position : 2258050 - 2259162 bp
Length : 1113 bp
Strand : +
Note : identified by match to protein family HMM PF00465

DNA sequence : 
ATGAATACCTTCTCACTACAAACGCGGTTGTACAGCGGTCAGGGCAGCCTGGCGGTGCTCAAGCGCTTTACCAATAAGCA
CATCTGGATAATCTGCGATGGCTTTCTGGCTCGCTCGCCGCTGCTGGATACCCTGCGTAACGCGCTGCCCGCAGATAACC
GCATCAGCGTCTTTAGCGAGATAACGCCGGACCCCACCATCCACACAGTGGTTCAGGGCATTGCGCAAATGCAGGCTCTG
CAACCGCAGGTGGTGATCGGTTTTGGCGGCGGCTCGGCAATGGACGCGGCGAAAGCGATTGTCTGGTTTAGCCAGCAAAG
CGGCATCAATATCGAAACCTGCGTGGCGATCCCGACCACCAGCGGCACCGGTTCGGAAGTCACCAGCGCCTGCGTAATTA
GCGACCCGGATAAAGGCATTAAGTATCCGCTGTTCAACAATGCGCTGTATCCGGATATGGCGATCCTTGACCCGGAGCTG
GTGGTCAGCGTTCCGCCGCAGATTACCGCCAACACCGGTATGGACGTGCTGACCCACGCCCTGGAGGCCTGGGTGTCACC
GCACGCCAGCGACTTTACCGACGCGCTGGCGGAAAAAGCCGCCAAACTGGTGCTCCAGTATCTGCCCACGGCGGTGGAAA
AAGGCGACTGCGTGGCGACGCGCGGGAAAATGCACAATGCCTCAACGCTCGCCGGGATGGCCTTCAGCCAGGCGGGGCTG
GGGCTTAACCACGCGATAGCCCACCAGCTCGGCGGACAGTTCCATCTGCCGCACGGGCTGGCCAATGCGCTGCTGCTCAC
GACGGTGATCCGCTTTAACGCGGGTGACCCGCGCGCCGCCAAACGCTACGCGCGGCTGGCCAAAGCCTGCGGTTTTTGCC
CGGCAGAAGCCAATGACGTTGCGGCGATCAATGCGCTGATTCAGCAAATCGAACTGCTTAAGCAACGCTGTGCCCTTCCC
TCACTGGCCGTTGCGCTTAAAGAAGGAAGATCCGACTTTTCCGCACGTATTCCGGCGATGGTGCAGGCCGCGCTGGCGGA
TATCACGCTGCGCACCAACCCGCGCCCGGCCAGCGCCGAGGAAATTCGCGAGCTGCTGGAGGAACTGCTATGA

Protein sequence : 
MNTFSLQTRLYSGQGSLAVLKRFTNKHIWIICDGFLARSPLLDTLRNALPADNRISVFSEITPDPTIHTVVQGIAQMQAL
QPQVVIGFGGGSAMDAAKAIVWFSQQSGINIETCVAIPTTSGTGSEVTSACVISDPDKGIKYPLFNNALYPDMAILDPEL
VVSVPPQITANTGMDVLTHALEAWVSPHASDFTDALAEKAAKLVLQYLPTAVEKGDCVATRGKMHNASTLAGMAFSQAGL
GLNHAIAHQLGGQFHLPHGLANALLLTTVIRFNAGDPRAAKRYARLAKACGFCPAEANDVAAINALIQQIELLKQRCALP
SLAVALKEGRSDFSARIPAMVQAALADITLRTNPRPASAEEIRELLEELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42074.1 hypothetical protein Not tested PAI II 536 Protein 4e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeD_A2388 YP_002216137.1 propanediol utilization: propanol dehydrogenase VFG1593 Protein 2e-45 42