|
Name : SeD_A2590 (SeD_A2590) Accession : YP_002216318.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein H2 Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG4235 EC number : - Position : 2468534 - 2469577 bp Length : 1044 bp Strand : - Note : identified by match to protein family HMM PF03918 DNA sequence : ATGAGACTGTTACCGGGCATGGTGATGCTGATGCTGGTGCTGGTTATCTCCGGGTCAGCGCGGGCGACCACCGACGTGAT GCCGTTTAAAGATGAAGCGCAGGAGCAGCAGTTCCGCCAGCTCACGGAGCAGCTGCGCTGCCCGAAATGCCAGAACAACA GCATTGCGGACTCGAACGCGATGATAGCCACCGACATGCGCCGCAGGGTGTATGACCTGATGCAGGAGGGGAAGAGCCGC CAGGAAATCATCGATTACATGGTGGCGCGCTACGGCAACTTCGTCACCTACGACCCGCCGCTGACCCCGCTGACGGTGCT GCTGTGGGTGCTGCCGCTGGCCGCCATCGTGGCGGGCGGGTGGATAATCGTTGCCCGCACGCGCCGGCGGGTGCGCCTGC GCCGGGAACCGCTGCCGGCGGACACCCCGGTTTGCGGCGCGCGCGCCGGGTGGGGCGTTTACGTGCCGGGGGCCGTCATT GCGCTGGCGGTCGGCGCCGGCAGCTACGCCCTGACCGGCAGCTATCAGCAGGTCAGGGCCTGGCAGCAGGCAACGGCGCA GACGCCCGGGCTGCTGGCGCGGGCGCTGGACCCGGCGGCGCAGCCGCTGAATGAAGAGGAGATGGCGCGGCTGGCGCTGG GGCTGCGCACCCGCCTGCAGAATGATGCCGGCAATGTTGAGGGCTGGCTCATGCTGGGGCGCACCGGTATGGTACTGGGT AATGCCGGTACCGCCACCGGGGCGTATGCGAACGCCTACCGTCTGGCCCCGAAAAACAGCGATGCGGCGCTGGGCTACGC GGAGGCGCTGACGCGCTCGTCCGACCCGGAGGATAACCGCCGCGGCGGGGAGCTGCTGCGTCAGCTGGTGAGCCGCGACC ACACGGATATCCGGGTGTTAAGCCTGTATGCGTTTAACGCCTTTGAGCAGCAGCGCTTTGGCGAGGCGGTGGCGGCCTGG GAGATGATGCTGAAACTGTTGCCGGCAGACGATACCCGGCGGGCGGTGATAGAGCGCAGTATCCGGCTGGCGCAGGAGAA ATAA Protein sequence : MRLLPGMVMLMLVLVISGSARATTDVMPFKDEAQEQQFRQLTEQLRCPKCQNNSIADSNAMIATDMRRRVYDLMQEGKSR QEIIDYMVARYGNFVTYDPPLTPLTVLLWVLPLAAIVAGGWIIVARTRRRVRLRREPLPADTPVCGARAGWGVYVPGAVI ALAVGAGSYALTGSYQQVRAWQQATAQTPGLLARALDPAAQPLNEEEMARLALGLRTRLQNDAGNVEGWLMLGRTGMVLG NAGTATGAYANAYRLAPKNSDAALGYAEALTRSSDPEDNRRGGELLRQLVSRDHTDIRVLSLYAFNAFEQQRFGEAVAAW EMMLKLLPADDTRRAVIERSIRLAQEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmH | YP_217239.1 | heme lyase subunit, cytochrome c-type biogenesis | Not tested | SPI-12 | Protein | 5e-119 | 97 |
