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Name : SeD_A0317 (SeD_A0317) Accession : YP_002214246.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : Rhs family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 337906 - 340680 bp Length : 2775 bp Strand : + Note : identified by match to protein family HMM PF03527; match to protein family HMM PF05593; match to protein family HMM TIGR01643 DNA sequence : ATGACGATGCACCGGGAGCCGGGCGGCGAACGGTATTACTACACCTGGGCGTGGTTTGAAGGCCCGGACGATGCGGCGTG GCGGGTGACGGGCCATCATACGGACAGCGGCGAGCAGTATCGTCTGGACTGGAATCTGGCAGAACGTTCGCTGTGCGTGA CGGATAGTCTGGGGCGTACGCGCTGCCACTGGTGGGATGCGCAGGGCCTGGTGACGGCGTACCGGGACGAGGCCGGGCAG ATGACCACTTTCCGCTGGAGCGATGAAGAGCGGTTACTGCTGGGGATGACGGACGCGCAGGGCGGCAAATGGCGTTATGT CTATGACCGTCTCGGCCACCTGACGGAGACGCATGACCCGCTGGGCCGGGTTGAGCAGACGCAGTGGCATCCGGTGTGGC ACCAGCCGGAAACGGAGGTGGATGCCGCGGGGGCGGCGTGGCGTTATGAGTATGATGAGCGGGGCAACCTGCAGGCGGTC AGCGACCCGCTGCACCAGCGCACGGTATACGGGTATGACCGGCACGGCCAGGTGGTGCGGATAACCGACGCGCGGGGCGG AGATAAATACCTGCAGTGGAACGAAGACGGGCAGCTTATGCGCCACACGGACTGTTCTGGCTCGCAGACGGCATGGTTTT ATGATGAACGCACGCGGCTGGAAAGGGTGACGGACGCGGAGAGTAACAGTACGCGTTACAGCTATGACGGCAACGGACAT CTGACGGAGGTCATGTTCGCGGACGGGCGTACGGAGCGTTACCAGCCGGATGCGGCGGGACGGCTGGTGAAATACACCAG CCCGGCGGGGCAGATAACACGCTGGCAGCGGGACGGCCAGGGGCGGGTGCGCAGGCAGACGGATGCGACGGGTCGCAGGA CGGCGTATGAGTACGACGCTTACGGGCGGCTGACCACGCTCACGAACGAGAACGGGGAAAGCTACCGGTTCCGGTACGAT GTTCTGGGCCGGGTGACGGAACAGACGGACCCCGGCGGCAGCCGCCGGGTATACGGGTATAACGCGCTGAATGCGGTGAC GGCAGTGATATACGGCGGGGAGCGCGGGGGCGAAATCCGCCACGGTCTGGAGCGTGATGCGGCGGGGAGGCTGACGGCGA AAATCACGCCGGAGACGCGCACGGAATACCGGTACGACGCGGCGGACCGTCTGCTGGAAATCCGCCGCAGGCAGCATGAT GCGGCGGAAGGCGGAGAGCCGGAAGTTATCCGGTTCAGCTACGACAGTGCGGGTAACCTGCTGAGCGAGGAGACGGCGCA GGGCGTGCTGCAGAACCGGTACGATGTTCAGGGCAACCGCACAGAAACGCAGATGCCGGATGGGCGGACGCTGCGGTACC TGTACTACGGGAGCGGCCATCTCCAGCAAATCAACCTGGGGCGTGATGTCATCAGCGAGTTCACGCGTGACCACCTGCAC CGTGAGGTGCAGCGGAGCCAGGGGCGGCTGGACACGCGGCGGATGTACGACCGGACGGGCCGGTTAACGCGGAAACTGAC CTGTAAAGGAATGCGCGGTGTGGTGCCGGAGACGTTTATCGACCGGGAATATGCGTACAGCGGCCAGGATGAGCTGCTGA AAAAGCGGCACAGCCGGCAGGGGGTGACGGATTATTTTTACGACACGACGGGGCGCATCACGGCGTGCCGGAATGAGGCA TACCTGGACAGCTGGCAGTACGACGCGGCGGCGAACCTGCTGGACAGGCGGCAGGGAGAGACCGCGCAGGCGGGTGCAGG CAGCGTGGTGCCGTTCAACCGGATAACGTCATACCGTGGGCTGCATTACCGTTACGATGAATATGGCCGGGTTGTGGAAA AGCGGGGCCGCAACGGCACGCAGCACTACCGCTGGGACGCGGAGCACCGGCTGACGGAAGTGGCGGTCACCCGGGGGGAC ACCGTACGGCGTTACGGGTACGTGTACGACGCGCCGGGCAGGCGGGTGGAGAAGCACGAGCTGGACGCGGAAGGAAAGCC GTATAACCGGACGACGTTTTTATGGGACGGAATGCGGCTGGCACAGGAGTGCAGGCTGGGAAGAAGCAGCAGCCTGTATA TCTACAGCGACCAGGGGAGCCACGAGCCGCTGGCGCGGGTGGACAGGGCGGCGCCGGGCGAAGCGGATGAGGTGCTGTAT TACCATACGGACGTAAACGGCGCGCCGGAGGAGATGACGGACGGCGGGGGCAATATTGTCTGGGAAGCGGGCTATCAGGT ATGGGGGAACCTGACGCATGAAAAAGAAACCCGGCCCGTACAGCAGAACCTGCGTTTCCAGGGGCAATATCTGGACAGGG AAACGGGGCTGCATTACAATTTGTACAGATTTTATGATCCGGATATCGGGAAGTTTATATCGGGCGATCCAATCTCGCTG AAGGGTGGAATAAACTTATATGCGTATGCACCGAATCCTCTGTCATGGATCGATCCTTTAGGTCTTAAATGTGGATCTTC GTATGAGCAGGCCAGAAATAAAGCCCTCAAATGGTTAGAAGAACGTGGATTTAAAGCGGAGAGAGTTAATATAGGTAAGT TCGGTTCGACAAGAGGAAAACCTGTAGGAATGACAACCGCCGATGGCAAAACAGGATTTAGGATCGAATATGATGAACGA AGTGGTGCCCATATTAATGTCTTCAGTGGAAAGGATAAAGGCGAACATTTCTTATTTGATGCAAGTGAATCTATCGTAAC AAAACTCCAAAAATTATTTGATCTTCCATCCAAACCTCAAAGGCCAATATCATGA Protein sequence : MTMHREPGGERYYYTWAWFEGPDDAAWRVTGHHTDSGEQYRLDWNLAERSLCVTDSLGRTRCHWWDAQGLVTAYRDEAGQ MTTFRWSDEERLLLGMTDAQGGKWRYVYDRLGHLTETHDPLGRVEQTQWHPVWHQPETEVDAAGAAWRYEYDERGNLQAV SDPLHQRTVYGYDRHGQVVRITDARGGDKYLQWNEDGQLMRHTDCSGSQTAWFYDERTRLERVTDAESNSTRYSYDGNGH LTEVMFADGRTERYQPDAAGRLVKYTSPAGQITRWQRDGQGRVRRQTDATGRRTAYEYDAYGRLTTLTNENGESYRFRYD VLGRVTEQTDPGGSRRVYGYNALNAVTAVIYGGERGGEIRHGLERDAAGRLTAKITPETRTEYRYDAADRLLEIRRRQHD AAEGGEPEVIRFSYDSAGNLLSEETAQGVLQNRYDVQGNRTETQMPDGRTLRYLYYGSGHLQQINLGRDVISEFTRDHLH REVQRSQGRLDTRRMYDRTGRLTRKLTCKGMRGVVPETFIDREYAYSGQDELLKKRHSRQGVTDYFYDTTGRITACRNEA YLDSWQYDAAANLLDRRQGETAQAGAGSVVPFNRITSYRGLHYRYDEYGRVVEKRGRNGTQHYRWDAEHRLTEVAVTRGD TVRRYGYVYDAPGRRVEKHELDAEGKPYNRTTFLWDGMRLAQECRLGRSSSLYIYSDQGSHEPLARVDRAAPGEADEVLY YHTDVNGAPEEMTDGGGNIVWEAGYQVWGNLTHEKETRPVQQNLRFQGQYLDRETGLHYNLYRFYDPDIGKFISGDPISL KGGINLYAYAPNPLSWIDPLGLKCGSSYEQARNKALKWLEERGFKAERVNIGKFGSTRGKPVGMTTADGKTGFRIEYDER SGAHINVFSGKDKGEHFLFDASESIVTKLQKLFDLPSKPQRPIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0324 | NP_454901.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 0.0 | 99 |
