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Name : SeD_A0334 (SeD_A0334) Accession : YP_002214260.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : LysR family transcriptional regulator SinR Function : - COG functional category : K : Transcription COG ID : COG0583 EC number : - Position : 352232 - 353179 bp Length : 948 bp Strand : + Note : identified by match to protein family HMM PF00126; match to protein family HMM PF03466 DNA sequence : ATGATGGAACTGATCAATAATCGTGGTATGCGAGACTGGATGATATTTATTAAAGTGGCGGAAGTAGGGAATCTTTCCCG GGCTGCACGGGAATTAGATATTAGCATTTCTGCTGTCAGTAAATCGCTTAGCCGCCTTGAGAATTCTATTGAGGTTACTT TACTTCGGCGCGATTCACATCACTTAGAACTGACTGGAGCTGGTCAGACAGCCTATGCAAGCATGAAAAGGATAACATCT TCCTTTCAGTCCTTGCTGGATGAATTGCGAAATCCGGATAAAATTATCAGAGGGAGTATAAAATTTTCGGCTCCGGCTAT TGTCTGTGAGTTTCTTGCCAATAAGTGGATATGGGAATTTACAGCTAGCTATCCGGATACAAAAATCTACCTGGATTCAC GAGAGCGTAGCGATTTTTTTAGTAAATCCCTGGAGTTTGATGAGCTGGTTTTTAAAAGTGGCATAATCGAAAGTGAGGAT CTCGTGTATCGAAAGATAAGCCCTTTAAAGTTGGCTCTTTGTGCGAGTCCGAAATATATCAGAAAATATGGCAGGATCTC ACACCCTGGCGATTTGGAAAATCACATTATTGTGGGTCTTCACAATCATGGTCTTTCCGGACCTCTTACTCTTTTCCGTC AAGATGAATCATACACTATTAGTGGCGCTGTTAATGTTCATTTATCTTCCAATAATCTTTTGAGTGTTCTTAATTTGGTT TTAGAAGGAAAGGGTATCAACCTTATGACTCCGGCCTGGCTTGCCACCAAATACTTAAAAAATAATGAACTTGAAATTAT ACTTCCTGAATGGAGGGTCCCAGATCTCCCCATTTATCTTGTATGGCGTCATCGTCAGTATTATTCTCCTTTATTTCAAC GCTTTCTGTCTTTTATTGAAGATAAATGGAATAATCGCCCACAAATTGATTTTCTGAATGATGATTAA Protein sequence : MMELINNRGMRDWMIFIKVAEVGNLSRAARELDISISAVSKSLSRLENSIEVTLLRRDSHHLELTGAGQTAYASMKRITS SFQSLLDELRNPDKIIRGSIKFSAPAIVCEFLANKWIWEFTASYPDTKIYLDSRERSDFFSKSLEFDELVFKSGIIESED LVYRKISPLKLALCASPKYIRKYGRISHPGDLENHIIVGLHNHGLSGPLTLFRQDESYTISGAVNVHLSSNNLLSVLNLV LEGKGINLMTPAWLATKYLKNNELEIILPEWRVPDLPIYLVWRHRQYYSPLFQRFLSFIEDKWNNRPQIDFLNDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sinR | NP_454910.1 | LysR-family transcriptional regulator SinR | Not tested | SPI-6 | Protein | 3e-134 | 99 |
