Gene Information

Name : Lferr_0563 (Lferr_0563)
Accession : YP_002219024.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 528224 - 528700 bp
Length : 477 bp
Strand : +
Note : PFAM: ribonuclease H; KEGG: hha:Hhal_1585 ribonuclease H

DNA sequence :
ATGCCCGAAAAAATCATAGAGCTCTTTACCGATGGCGGGTGCCGCGGTAATCCCGGTATCGGCGCCTGGGGCGTGTGGCT
GCGGCTGGCTGGACAGGAGCGGGTCTTGTGGGGCTTCGTCCCGGAAACGACGAACAACCGGATGGAGCTGACGGCGGCTT
TGCGCGGTCTGGAGGCGCTCAAGCGACCCAGCGCCGTGCGGGTGATCAGTGATTCCCGTTATCTGCGGGATGGCATGACC
CAGTGGCTGGCTGGCTGGCAGCGCCGGGGCTGGCGGACGGCGGGCGGGGACGCGGTCAAAAATCGCGATATCTGGGAGTT
GTTGGCGGCGGTGGCCGCCCGCCACCAGGTCCAGTGGGAGTGGGTGAGAGGCCACTCCGGGCATATCGAGAATGAACGGG
TGGACGCACTGCTGAATCGGGTCATGGATCAGTATGCGGCGGGCGGGCAGGCGCGGGAGGGCGAGGGATGGCTGTGA

Protein sequence :
MPEKIIELFTDGGCRGNPGIGAWGVWLRLAGQERVLWGFVPETTNNRMELTAALRGLEALKRPSAVRVISDSRYLRDGMT
QWLAGWQRRGWRTAGGDAVKNRDIWELLAAVAARHQVQWEWVRGHSGHIENERVDALLNRVMDQYAAGGQAREGEGWL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 7e-31 52