Gene Information

Name : Lferr_0847 (Lferr_0847)
Accession : YP_002219304.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 806370 - 807332 bp
Length : 963 bp
Strand : -
Note : PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mfa:Mfla_1669 transcriptional regulator CysB-like protein

DNA sequence :
ATGAACCTGCAACAGCTTCGTTTCATCTGCGCGGTGGTACGCCAGAACTTCAATGCGTCGGCCGCCGCCGACAGTCTGTA
TACCTCACAACCGGGGGTGAGCAAACAGATCCAACTCCTGGAAGAGGAGATCAATGTGGCGCTTTTCGTGCGCAAAGGGA
AGCGCATCATCGGAATGACCCCGGCGGGCGAGCAGATATTCACTTTTGCACAGCGGGTAGTCGGCGATATCGAGAATATC
CGAAAAGTAGGTCAGGAGTTTTCTCAGGGCGATCGTGGGGAATTTGTGATCGCCACCACCCATACCCAAGCGCGATACAG
CTTGCCCAAGGCGATAAAGACCTTTACGGAACGCTACCCAGGGGTTCAGTTGCGCCTGCGCCAGGGCAACCCTACCCAGA
TCGCGGAGATGCTTGCGGCGGGGGAGGCAGACGTGGCGATCGCAACGGAGTCGTTGAATTCCTACGCGGGCCTTGTCGCC
CTGCCCTGTTATCAGTGGAATCGCGTCGTGATCACCCCTACCGGCCATCCGCTGCTGCAAAGCCAGCCACTGACACTGGA
AGCAGTCGCCGCCTATCCCATAGTAACCTACGACCAGGCCTTTGCTGGGCGCTCCCTGATCGACAAGACTTTCGCCAATC
GCGGCCTGTCCCCCAACATCGTGCTTTCCGCCATAGACTCCGACGTCATCAAGGCGTATGTGGAACTGGGGTTAGGGATA
GGCATCGTCGCCAAAATGGCTTATGACCCTGTACGGGACATCAAGCTGGAGGTGATCGATGCGAGTCACCTGTTCGATCC
CAGCACCACCTACCTGGCCTTGAGGCAGGGAACCTATTTACGCGGGTATCTATACACCTTCATAGCGTTATACGCGCCAC
ACCTCGATCGCAACACGGTGGATCGGGCCCTGGATTCCACAGTTGCTTCCAGGGCGTTATTGCCGTTACCCTCCGGTTCG
TGA

Protein sequence :
MNLQQLRFICAVVRQNFNASAAADSLYTSQPGVSKQIQLLEEEINVALFVRKGKRIIGMTPAGEQIFTFAQRVVGDIENI
RKVGQEFSQGDRGEFVIATTHTQARYSLPKAIKTFTERYPGVQLRLRQGNPTQIAEMLAAGEADVAIATESLNSYAGLVA
LPCYQWNRVVITPTGHPLLQSQPLTLEAVAAYPIVTYDQAFAGRSLIDKTFANRGLSPNIVLSAIDSDVIKAYVELGLGI
GIVAKMAYDPVRDIKLEVIDASHLFDPSTTYLALRQGTYLRGYLYTFIALYAPHLDRNTVDRALDSTVASRALLPLPSGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 1e-70 46