Gene Information

Name : ssaQ (SG1698)
Accession : YP_002226667.1
Strain : Salmonella enterica 287/91
Genome accession: NC_011274
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1886
EC number : -
Position : 1770383 - 1771351 bp
Length : 969 bp
Strand : -
Note : -

DNA sequence : 
ATGTTAAGAATAGCGAATGAAGAGCGTCCGTGGATGGAGATGCTTCCAACGCAAGGCGCTACCATTGGTGAGCTGACATT
GAGTATGCAACAATATCCAGTACAGCAAGGGACATTATTTACCATAAATTATCATAATGAGCTGGGTAGGGTGTGGATTG
CAGAAGAATGCTGGCAGCGCTGGTGTGAAGGGTTAATTGGCACCGCTAATCGATCGGCTATCGATCCTGAATTGCTATAT
GGAATAGCTGAATGGGGGCTGGCGCCGTTATTGCAAGCCAGTGATGCAACCCTCTGTCAGAACGAACCGCCAACATCCTG
CAGTAATCTACCACATCAGCTAGCGTTGCATATTAAATGGACAGTTGAAGAACATGAGTTCCATAGCATTATTTTTACAT
GGCCAACGGGTTTTTTGCGCAATATAGTCGGAGAGCTTTCTGCTGCGCGACAACAGATTTATCCTGCCCCTCCTGTAGTA
GTCCCTGTATATTTAGGCTGGTGCCAGCTTACGTTAATTGAACTTGAGTCTATCGAAATCGGCATGGGCGTTCGGATTCA
TTGCTTTGGCGACATCAGACTCGGTTTTTTTGCTATTCAACTACCTGGGGGGATCTACGCGAGGGTGTTGCTGACAGAGG
ATAACACGATGAAATTTGATGAATTAGTCCAGGATATCGAAACGCTACTTGCGTCAGGGAGTCCAATGTCAAAGAGTGAC
GGAACATCTTCAGTAGAACTTGAGCAGATACCACAACAGGTGCTCTTTGAGATCGGACGTGCGAGTCTGGAAATTGGACA
ATTACGACAACTTAAAACGGGGGACGTTTTGCCTGTAGGTGGATGTTTTGCGCCAGAGGTGACGATAAGAGTAAATGACC
GTATTATTGGGCAAGGTGAGTTGATTGCCTGTGGCAATGAATTTATGGTGCGTATTACACGTTGGTATCTTTGCAAAAAT
ACAGCGTAA

Protein sequence : 
MLRIANEERPWMEMLPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEECWQRWCEGLIGTANRSAIDPELLY
GIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKWTVEEHEFHSIIFTWPTGFLRNIVGELSAARQQIYPAPPVV
VPVYLGWCQLTLIELESIEIGMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMSKSD
GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGELIACGNEFMVRITRWYLCKN
TA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaQ NP_456110.1 putative type III secretion protein Virulence SPI-2 Protein 6e-142 99
ssaQ NP_805089.1 type III secretion system protein Virulence SPI-2 Protein 6e-142 99
ssaQ NP_460383.1 type III secretion system protein Virulence SPI-2 Protein 5e-142 99
ssaQ YP_216426.1 type III secretion system protein Virulence SPI-2 Protein 1e-142 99
ssaQ CAA70540.1 secretion system apparatus Virulence SPI-2 Protein 4e-97 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaQ YP_002226667.1 type III secretion system protein VFG0518 Protein 2e-142 99