Gene Information

Name : safB (SG0309)
Accession : YP_002225426.1
Strain : Salmonella enterica 287/91
Genome accession: NC_011274
Putative virulence/resistance : Virulence
Product : atypical fimbria chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 341020 - 341736 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGGCGGCTGTTTTATTCGTCTCTAATTCTATAACTCCTCCAGTGTATGCCTCTGAGCAGAAATTAAATTTAAACACTAA
ATCATTCAGCGTGAAGCTGGGGGCTACACGGGTGATTTATCACGCTGGTACAGCTGGAGCCACGCTCTCGGTGAGCAACC
CGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCGCCTGCTCCCTTTTTGGTGATGCCG
CCTCTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGGTGGTGACATGCCAACGGATCGTGA
GACTTTACAGTGGGTCTGTGTAAAGGCGGTACCACCCGAAAATGAACCGTCGGATACACAGGCTAAGGGCGCGACCCTTG
ACCTCAATTTGTCCATTAACGTCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTGAAGGGGACGCCGGAAGATGTTGCA
GGAAATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTGGAGAACCCCACCCCGTTTTACATGAATTTAGCCTCCGT
CACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCTTTTGCTGACAAAACACTAAATATGCCAGGTAGTG
CCCATGGTGATATCGAGTGGAGAGTTATTACAGACTTTGGTGGTGAAAGTCATCCGTTCCACTACGTCCTTAAATAA

Protein sequence : 
MAAVLFVSNSITPPVYASEQKLNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMP
PLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCVKAVPPENEPSDTQAKGATLDLNLSINVCDKLIFRPDAVKGTPEDVA
GNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGSAHGDIEWRVITDFGGESHPFHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 2e-109 98
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 2e-54 50
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 2e-54 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
safB YP_002225426.1 atypical fimbria chaperone VFG0943 Protein 5e-52 52
safB YP_002225426.1 atypical fimbria chaperone VFG0850 Protein 2e-55 50
safB YP_002225426.1 atypical fimbria chaperone VFG0852 Protein 2e-53 49
safB YP_002225426.1 atypical fimbria chaperone VFG0858 Protein 3e-52 49