Gene Information

Name : pipA (SG0976)
Accession : YP_002226042.1
Strain : Salmonella enterica 287/91
Genome accession: NC_011274
Putative virulence/resistance : Virulence
Product : pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1062687 - 1063367 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
ATGCTTCCGGTCACCTACAGATTAATACCTCAAAGCGGAGTATCCACATATGGATTAAATACCGCAGATACACCTGTTTT
CCCCGATATTCCCGAACATGCACCAAACCCCTCACGGCTACGCCTTGCTCATGACAGCCTTGCCATAAACAGTGAATTCC
GTCTGGAGCCAGAGTGTGTGGTGGAGTACCTTATCTCAGGCGCGGGTGGAATAGACCCTGATACAGAAATTGATGACGAC
ACTTATGACGAATGCTACGATGAACTATCCTCCGTACTTCAAAATGCGTATACCCAAAGCGAAACATTCCGCAGACTGAT
GAGTTACGCATATGAAAAAGAACTACATGATGTGGAGCAGCGCTGGCTACTGGGGGCAGGCGAAGCCTTTGAAACTACCG
TGGCTCAGGAACACTTCAAACTTTCAGAAGGCAGGAAAGTTATTTGTCTCAATCTGGACGATTCTGATGATTCATATACC
GAACATTATGAAAGTAACGAAGGAAGACAACTTTTTGACACAAAACGTTCATTTATTCATGAAGTTGTACATGCACTGAC
CCATCTTCAGGATAAAGAAGAAAATCATCCAAGAGGCCCTGTTGTCGAATATACCAACATTATTCTGAAAGAGATGGGGC
ATCCTTCACCTCCCAGAATGGTCTACATCTTCAATAAATAG

Protein sequence :
MLPVTYRLIPQSGVSTYGLNTADTPVFPDIPEHAPNPSRLRLAHDSLAINSEFRLEPECVVEYLISGAGGIDPDTEIDDD
TYDECYDELSSVLQNAYTQSETFRRLMSYAYEKELHDVEQRWLLGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYT
EHYESNEGRQLFDTKRSFIHEVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipA NP_460060.1 pathogenicity island-encoded protein A Virulence SPI-5 Protein 3e-93 99
pipA NP_455585.1 conserved hypothetical protein Virulence SPI-5 Protein 7e-93 99
pipA AAC33726.1 PipA Virulence SPI-5 Protein 2e-92 98
pipA YP_216026.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 3e-92 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pipA YP_002226042.1 pathogenicity island protein VFG0588 Protein 1e-93 99