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Name : secD (KPK_4325) Accession : YP_002240125.1 Strain : Klebsiella pneumoniae 342 Genome accession: NC_011283 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 4360067 - 4361914 bp Length : 1848 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGGTCGTCGTCATTGTCGTCGGCCTGATCTATGCGCTTCCCAA CCTGTATGGTGAGGATCCGGCTGTTCAAATCACTGGCGCGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC AGAAAACTTTACAAGAAGAAAAAATAACCGCGAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACC ACTGATACCCAGCTGCGTGCGCGTGAAGCGCTGCTTACCGTGCTGGGTGACAAATACGTCGTGGCGCTAAACCTTGCTCC GGCAACCCCACGCTGGCTGGCGGCACTCTATGCCGAGCCAATGAAGCTGGGTCTTGATCTGCGCGGCGGCGTGCACTTCC TGATGGAAGTCGACATGGACACCGCGTTAGGCAAGCTGCAGGAACAGAACATCGACAGCCTGCGCAGCGAACTGCGTGAC AAAGGCATTCCTTACGCGACCGTGCGCAAGGAAGACAATTATGGTCTGAGCATCGTCTTCCGCGACAGCGCGGCGCGCGA CCAGGCTATCTCTTATCTCAGCCCTCGCCATCGCGACCTGGTGATTTCCTCGCAGGGTGACAACAGCCTGAAAGCGGTGA TGACCGATGAGCGTCTGAAAGAAGCCCGTGAGTACGCGGTTCAGCAGAACATTAACATTCTGCGTAACCGTGTGAACCAG CTGGGCGTCGCCGAACCGCTGGTTCAGCGTCAGGGTGCTGACCGCATCGTGGTTGAGCTGCCGGGTATCCAGGATACCGC GCGGGCGAAAGAGATCCTTGGCGCAACCGCGACCCTCGAGTTCCGTCTGGTCAATACCAACGTGGACCAGTCCGCCGCTG CCTCTGGCCGCGTGCCGGGCGACTCGGAAGTGAAAGAGACGCGTGAAGGCCAGCCGGTGGTGCTGTACAAGCGAGTGATC CTGACCGGTGACCATATCACCGACTCGACCTCCAGCATGGATGAGTACAACCAGCCGCAGGTCAACATCTCGCTGGACAG CGCGGGCGGTAATATCATGTCTAACTTCACCAAGGACAATATCGGTAAGCCGATGGCGACCCTGTTCGTGGAGTATAAAG ACAGCGGTAAGAAAGACGCTAACGGTCGCGCTATCCTGGCGAAAGAGGAAGAGGTGATTAACATCGCCAACATCCAGTCG CGTCTGGGTAACAGCTTCCGTATCACCGGTATCAGCAACCCGAACGAAGCACGCCAGCTGTCGCTGCTGCTGCGTGCCGG CGCGCTGATTGCCCCGATTCAGATCGTCGAAGAGCGGACTATCGGCCCAACCCTTGGTATGCAGAACATCAAGCAGGGTC TGGAAGCCTGTCTGGCCGGCCTGGTGGTCTCTATCCTGTTCATGATCCTCTTCTATAAGAAGTTCGGTCTGATTGCGACC TCGGCGCTGATTGCCAACCTGGTGCTGATTGTCGGCATTATGTCCCTGATCCCGGGGGCGACGCTGACCATGCCGGGCAT CGCGGGTATCGTGTTAACCCTTGCGGTGGCGGTCGATGCTAACGTTCTGATCAACGAGCGTATCAAAGAAGAGCTGAGCA ACGGGCGTACCGTTCAGCAGGCGATTGACGAAGGTTATCGCGGCGCGTTCAGCTCGATCTTCGACGCCAACGTGACGACG CTTATCAAAGTGATCATCCTGTACGCGGTCGGTACCGGTGCCATTAAAGGGTTTGCGATTACCACCGGTATCGGTATCGC GACCTCAATGTTTACCGCTATCGTCGGCACCCGTGCCATCGTGAACCTGCTGTACGGCGGCAAGCGCGTTAAAAAGCTGT CTATCTGA Protein sequence : MLNRYPLWKYVMLVVVIVVGLIYALPNLYGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDT TDTQLRAREALLTVLGDKYVVALNLAPATPRWLAALYAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSELRD KGIPYATVRKEDNYGLSIVFRDSAARDQAISYLSPRHRDLVISSQGDNSLKAVMTDERLKEAREYAVQQNINILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQSAAASGRVPGDSEVKETREGQPVVLYKRVI LTGDHITDSTSSMDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILAKEEEVINIANIQS RLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMILFYKKFGLIAT SALIANLVLIVGIMSLIPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANVTT LIKVIILYAVGTGAIKGFAITTGIGIATSMFTAIVGTRAIVNLLYGGKRVKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-119 | 49 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-120 | 49 |
