|
Name : KPK_5054 (KPK_5054) Accession : YP_002240829.1 Strain : Klebsiella pneumoniae 342 Genome accession: NC_011283 Putative virulence/resistance : Unknown Product : oligogalacturonate-specific porin protein KdgM Function : - COG functional category : - COG ID : - EC number : - Position : 5107146 - 5107898 bp Length : 753 bp Strand : - Note : identified by match to protein family HMM PF06178 DNA sequence : ATGCGTACAAAAACCGCTTTTATTATGTGTTGCGTTCTTGGCATTCCTGCAGCCGGCCACGCGCTGACCTTTGATGTCAG GGGAGGATATCGGGCGGGAAGCCACTCTTACGAGTCCCGCTATAAGGTCAGCCAGGGGTGGGAAACAGGCTGGTGGGCGA GTATGGAGATGGATAACAAAAACAACAAAAATAACCATCAGGGCAACCAGGGTACCGACAGAGCTGATGGTTCCCACTCC TTTGGCGACAGCACGGTCGATTATAATGAAATAGAGGCTAACTATAGCTGGCCATTCGCCGATAAATGGGCCTTGCAGCC TGGCGGCATCTATCACTGGAGCAGCAAAGGCACTCAGCTACGGCCTTATCTGCGCGTTAATTATAAAGCCACGCCCGACC TTACCTTTGGGCTGCGTTATCGCTATGACTACAACACTTATGAAACGGTCAATAGTGCCGGTGAGTCGCATCGGGATAGC GTCAATCGTCTGGATTTATATGTTGCCTATAAATTTAATGCACAATGGAGCGCCTTATATCAAGGCACGGTCTATCGCCA CGTCAATGACGACTATAAGTATAAAAATGATAAGTCTTCGGCGACAGAAAATGCGCTAACGCTACGCTATAAATGGAATG ACTGGTTTAGTCCCTATATCGAATATGATTATCTCGGGAAACAGGGCTACCATGACGGCCAAAATAAAATCTCAGAATCA CGGTATCGTATTGGCATGACGTTTACGCTATAA Protein sequence : MRTKTAFIMCCVLGIPAAGHALTFDVRGGYRAGSHSYESRYKVSQGWETGWWASMEMDNKNNKNNHQGNQGTDRADGSHS FGDSTVDYNEIEANYSWPFADKWALQPGGIYHWSSKGTQLRPYLRVNYKATPDLTFGLRYRYDYNTYETVNSAGESHRDS VNRLDLYVAYKFNAQWSALYQGTVYRHVNDDYKYKNDKSSATENALTLRYKWNDWFSPYIEYDYLGKQGYHDGQNKISES RYRIGMTFTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECUMN_3381 | YP_002414052.1 | putative N-acetylneuraminic acid outer membrane channel protein nanC | Not tested | Not named | Protein | 2e-40 | 43 |
