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Name : potB (VSAL_I1581) Accession : YP_002263013.1 Strain : Genome accession: NC_011312 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 1691299 - 1692156 bp Length : 858 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAACAAGAAGTTTAATCTCCAAAATATCATCATCACCGTTATTGTAACGTGGTTACTGTTGTTCGTGTTCATTCCTAA TGTAATGATCATAGGCACAAGTTTCCTTACTCGTGATGAAGCAAATTTAATCGAAATGACGTTTACACTAGATAACTATC TTCGTCTTTTTGATCCTTTGTACGCAAAAGTACTGTGGCATTCATTTTATATGGCCATTGTTGCAACACTACTGTGTTTA GTTGTGGGTTACCCATTTGCTTACATTGTTGCAAAAATGCCAGAAAAATGGCGCCCATTTATGCTGTTTTTAATCATTGT TCCTTTTTGGACTAACTCACTGATCCGTACTTACGGACTTAAAATTGTGTTAGGAACTCAAGGTATTTTGAATAAAGGGT TACTTGCGATGGATATCATTGATAAACCATTACGCATTATGTATTCAGAAACAGCGGTAATGATAGGTTTAGTCTATATC CTATTACCATTTATGATTTTGCCTTTGTACTCTGCAATTGAAAAGCTAGATAATACCTATTTAGAAGCAGCAAAAGATCT TGGCGCAAATAAGCTACAAACACTATTAAAAATAGTTCTGCCATTAACCATGCCAGGGATCATTGGTGGTTGCTTATTAG TTCTACTCCCCGCTCTTGGTATGTTCTATATTTCTGATTTATTAGGCGGCGCGAAAAACCTATTAATCGGTAATGTTATT AAAAGCCAAGTATTAAACGCTCGAGATTGGCCATTTGGTGCAGCGACCAGTATTGCCCTCACCTTGGCAATGGCATTAAT GCTGTATGCTTATTATCGAGCTGGCAAGTTATTAAATAAAAAGGCGGATCTAGACTGA Protein sequence : MNKKFNLQNIIITVIVTWLLLFVFIPNVMIIGTSFLTRDEANLIEMTFTLDNYLRLFDPLYAKVLWHSFYMAIVATLLCL VVGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQGILNKGLLAMDIIDKPLRIMYSETAVMIGLVYI LLPFMILPLYSAIEKLDNTYLEAAKDLGANKLQTLLKIVLPLTMPGIIGGCLLVLLPALGMFYISDLLGGAKNLLIGNVI KSQVLNARDWPFGAATSIALTLAMALMLYAYYRAGKLLNKKADLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 2e-74 | 70 |
