|
Name : ECH74115_B0019 (ECH74115_B0019) Accession : YP_002268405.1 Strain : Genome accession: NC_011350 Putative virulence/resistance : Virulence Product : type I secretion system ATPase family protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 3759 - 5879 bp Length : 2121 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01846 DNA sequence : ATGATGAGTAAATGTAGTTCTCATAATAGTCTGTATGCACTGATATTGCTTGCACAATATCATAATATAACTGTCAATGC TGAAACTATAAGGCATCAGTATAATACCCACACACAAGATTTTGGGGTGACTGAATGGTTACTGGCAGCGAAATCTATTG GCTTAAAAGCAAAATATGTAGAAAAACATTTTTCCAGATTGTCAATAATTTCTTTACCTGCGTTGATATGGCGGGATGAC GGTAAGCATTATATATTGTCTCGTATTACTAAAGATTCATCACGCTATCTTGTTTATGATCCAGAACAACATCAGTCACT AACTTTTAGTCGGGATGAGTTTGAAAAACTGTATCAGGGAAAAGTCATTCTGGTTACGTCAAGAGCAACAGTAGTCGGAG AGTTAGCTAAATTTGATTTTTCTTGGTTTATCCCCTCTGTTGTGAAATACAGGAGGATTTTACTTGAGGTGTTAACTGTT TCTGCTTTTATTCAGTTTCTTGCGTTAATAACACCTCTTTTTTTTCAGGTTGTAATGGATAAGGTTTTAGTTCACCGGGG GTTTTCAACGTTAAATATTATCACAATAGCATTTATTATAGTGATACTTTTTGAAGTGATATTAACCGGAGCCAGAACTT ATATTTTCTCTCATACTACAAGTCGTATTGACGTCGAACTGGGTGCTAAGTTATTCAGACATTTGCTTGCATTGCCTGTT TCATATTTTGAAAATCGCAGGGTCGGAGAGACCGTTGCCAGAGTAAGGGAACTGGAGCAAATTCGTAATTTTTTAACCGG ACAAGCGTTGACATCAGTTCTTGATCTATTTTTTTCTGTAATATTTTTTTGTGTCATGTGGTATTACAGCCCTCAATTAA CACTGGTTATATTATTGTCACTACCTTGTTATGTTATATGGTCATTGTTTATATCACCCTTATTACGTCGACGTCTTGAT GATAAGTTTCTCAGGAATGCAGAAAATCAAGCTTTTCTTGTCGAAACGGTAACAGCAATAAATACAATCAAATCCATGGC AGTATCACCACAGATGATTGCTACATGGGATAAACAACTGGCCGGGTATGTTGCTTCCAGTTTCAGGGTAAATCTGGTTG CAATGACAGGGCAGCAGGGGATACAGCTGATACAGAAAAGTGTAATGGTAATTAGTCTATGGATGGGAGCACATCTTGTC ATATCGGGAGAGATAAGCATCGGGCAGTTAATCGCGTTTAATATGCTTGCAGGTCAGGTCATTGCTCCTGTTATCAGACT GGCTCATCTTTGGCAGGATTTTCAGCAGGTTGGTATTTCTGTTGAGCGCCTTGGTGATGTATTAAATACACCGGTAGAGA AAAAGTCAGGCAGAAATATACTGCCGGAAATTCAGGGGGATATCGAATTTAAAAATGTCAGATTTCGGTATTCTTCTGAC GGTAATGTTATTTTGAATAATATTAATTTATACATATCAAAGGGGGATGTTATCGGTATAGTTGGCCGTTCTGGTTCAGG AAAAAGTACATTAACAAAACTGCTTCAGCGCTTTTATATACCAGAGACCGGACAGATTTTAATTGATGGGCATGATTTAT CACTTGCAGATCCAGAATGGTTACGACGCCAGATTGGTGTTGTATTGCAGGAAAATATACTATTAAATCGTAGTATTATC GATAATATTACATTAGCTTCTCCGGCTGTATCTATGGAACAGGCTATTGAGGCAGCCAGACTTGCAGGTGCCCATGATTT TATTAGAGAACTAAAAGAAGGGTACAATACTATTGTTGGAGAACAGGGCGTTGGTCTTTCAGGAGGGCAGCGCCAACGGA TCGCAATAGCCCGGGCTCTTGTTACAAATCCTCGAATTCTTATTTTTGATGAAGCAACCAGTGCTCTTGATTATGAGTCG GAAAATATAATAATGAAAAATATGTCAAGAATATGTAAGAACAGAACCGTAATTATTATTGCACACAGGTTGTCAACTGT AAAAAATGCAAACAGAATAATTGTTATGGATAATGGCTTTATTTCTGAAGATGGCACACATAAAGAGCTTATCTCCAAAA AAGACAGTTTATATGCATATTTATATCAGTTGCAGGCATAA Protein sequence : MMSKCSSHNSLYALILLAQYHNITVNAETIRHQYNTHTQDFGVTEWLLAAKSIGLKAKYVEKHFSRLSIISLPALIWRDD GKHYILSRITKDSSRYLVYDPEQHQSLTFSRDEFEKLYQGKVILVTSRATVVGELAKFDFSWFIPSVVKYRRILLEVLTV SAFIQFLALITPLFFQVVMDKVLVHRGFSTLNIITIAFIIVILFEVILTGARTYIFSHTTSRIDVELGAKLFRHLLALPV SYFENRRVGETVARVRELEQIRNFLTGQALTSVLDLFFSVIFFCVMWYYSPQLTLVILLSLPCYVIWSLFISPLLRRRLD DKFLRNAENQAFLVETVTAINTIKSMAVSPQMIATWDKQLAGYVASSFRVNLVAMTGQQGIQLIQKSVMVISLWMGAHLV ISGEISIGQLIAFNMLAGQVIAPVIRLAHLWQDFQQVGISVERLGDVLNTPVEKKSGRNILPEIQGDIEFKNVRFRYSSD GNVILNNINLYISKGDVIGIVGRSGSGKSTLTKLLQRFYIPETGQILIDGHDLSLADPEWLRRQIGVVLQENILLNRSII DNITLASPAVSMEQAIEAARLAGAHDFIRELKEGYNTIVGEQGVGLSGGQRQRIAIARALVTNPRILIFDEATSALDYES ENIIMKNMSRICKNRTVIIIAHRLSTVKNANRIIVMDNGFISEDGTHKELISKKDSLYAYLYQLQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 73 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 73 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECH74115_B0019 | YP_002268405.1 | type I secretion system ATPase family protein | VFG0841 | Protein | 0.0 | 100 |
| ECH74115_B0019 | YP_002268405.1 | type I secretion system ATPase family protein | VFG1501 | Protein | 0.0 | 73 |
| ECH74115_B0019 | YP_002268405.1 | type I secretion system ATPase family protein | VFG0907 | Protein | 0.0 | 73 |
| ECH74115_B0019 | YP_002268405.1 | type I secretion system ATPase family protein | VFG1557 | Protein | 0.0 | 73 |
| ECH74115_B0019 | YP_002268405.1 | type I secretion system ATPase family protein | VFG1269 | Protein | 0.0 | 53 |
