Gene Information

Name : Gdia_1762 (Gdia_1762)
Accession : YP_002276141.1
Strain : Gluconacetobacter diazotrophicus PAl 5
Genome accession: NC_011365
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1949024 - 1951627 bp
Length : 2604 bp
Strand : -
Note : KEGG: gox:GOX1463 ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain prote

DNA sequence :
ATGAATATCGAAAAATTCACCGAACGGTCGCGCGGCTTTCTTCAGGCCGCCCAGACGATCGCGGTGCGTGACTATCATCA
GCAACTGACGCCGGAACATCTGCTGAAGGCGCTGCTGGACGACCCGGAAGGGGCGGCGTCCTCGCTGATCCGTGCCGCCG
GTGGGCAGGCACCGGCGGTCCAGGCGGCGGTCGAGGCCGCGCTGGCCAAGGTGCCGCGCGTACAGGGTGGCGGGGCCGGG
CAGCCGCAGGCCACGCCCGACCTCGTCCGCCTGTTGGATGCCGCGCAGACCGCGGCGCAGAAGGCCGGTGACGAATATGT
GGCGCAGGACCGGCTGCTGGTCGCCATCGCCGCGTCGGACACGCCGGCCGGCCGCGCCCTGCGCGACGGCGGTGCCACGG
CGCAGGCGCTGGACAAGGCGGTGGCCGCCATCCGCAAGGGCCGCACCGTGACCAGCGAGAACGCCGAGGCCAGCTTCGAC
GCGCTGAAGAAATACGCCCGCGACGTAACGGAAATCGCCCAGCAGGGCAAGCTGGACCCGGTCATCGGCCGCGACGAGGA
AATCCGTCGCGCGATCCAGGTCCTGGCCCGGCGCAGCAAGAACAACCCGGTGCTGATCGGCGAGCCCGGCGTGGGCAAGA
CCGCGATCGTCGAAGGGCTGGCCCTGCGCATCGTCAACGGCGACGTACCCGAGGCGCTGAAGAACAAGAAGCTGCTGTCG
CTTGATCTCGGGGCGCTGGTGGCCGGCGCGAAGTTCCGCGGCGAGTTCGAGGAACGGCTGAAAGCCGTGCTGAAGGAGAT
CGAAAGCGCCGAGGGGCAGGTCATCCTGTTCATCGACGAGATGCACACCCTCGTCGGCGCCGGCCGCACGGACGGCGCGA
TGGATGCCTCCAACCTGATCAAGCCGGAACTGGCGCGCGGCACCCTGCACTGCATCGGCGCCACGACGTTGGACGAATAC
CGCAAATATATCGAAAAGGACGCGGCCCTCGCCCGGCGCTTCCAGCCGGTCTATGTCGGCGAGCCCTCGGTGCCCGACAC
GATTTCGATCCTGCGCGGCATCAAGGAGAAGTACGAGCTCCATCACGGCGTGCGCATCACCGACAACGCGCTGGTGGCGG
CGGCGACGCTGTCCAACCGCTACATCACCGACCGCTTCCTGCCGGACAAGGCGATCGACCTGGTGGACGAAGCTGCCAGC
CGCCTGCGCATGCAGATCGACAGCAAGCCCGAGGAACTGGACGAACTCGACCGCCGCCTGATCCAGCTCAAGATCGAGCG
CGAGGCGATTCGCAAGGAAGACGACTCCGCCAGTCGGGAACGGCTGGTGAAGCTGGAAGCCGAACTGGCGGACATCGAGG
AAAAATCGAACGCCATGTCTGCGGCGTGGCACGCCGAGAAGGACCGGGTGAACGCAGTCCAGAAGCTGAAGGAACAGCTC
GACCAGGCGCGCTCGGACGTCGAGGTGGCGCAGCGGCGCGGCGATCTGGGGCGGGCGTCGGAACTGATGTACGGCGTCAT
CCCGAACCTGCAGGAGAAGATCGCCCAGGCGCAGGAGGAAAACGAAAGCGCGGCCCAGGGGGCCGGCTTGGTCAGCGAGG
CCGTGACCGAACAGGGCATCGCCTCCGTCGTGTCACGCTGGACCGGCGTGCCGGTGGACCGGATGCTGGAGGGCGAGCGG
GCGAAGCTGCTGCGGATGGAGGACGAACTGCGCCGCAGCGTGGTGGGCCAGGAACCGGCGCTGAAGGCCGTGGCGAACGC
CGTGCGGCGTGCGCGCGCCGGCCTGCAGGACCCCAACCGGCCGATCGGCTCGTTCCTGTTCCTCGGCCCGACCGGCGTGG
GCAAGACCGAGCTGTGCAAGGCGCTGGCCCGCTTCCTGTTCGATGACGAAAAGGCGCTGCTCCGCGTGGACATGAGCGAG
TTCATGGAAAAGCACGCGGTCTCCCGCCTGATCGGCGCCCCCCCGGGCTATGTCGGGTATGAGGAGGGCGGCGTCCTGAC
CGAGGCCGCGCGCCGCCGGCCCTATCAGGTGATCCTGTTCGACGAGGTGGAGAAAGCGCACGAGGATGTCTTCAACGTCC
TGCTGCAGGTGCTTGATGACGGCCGCCTGACGGACGGGCAGGGGCGGACGGTCGATTTCCGCAACACCATCATCGTCCTG
ACCAGCAACCTGGGGTCCGATGTCCTGGCCCATCTGCCGGACAACGAATCGACGGAAATGGTCCAGGCCGAGGTCATGAA
GGTGGTGCGGGCGCATTTCCGGCCGGAATTCCTCAACCGGCTGGATGAAATCATCCTGTTCTCGCGCCTGCAGCGCGCGG
ACATGACCCGCATCGTCGATATCCAGATCGCGCGCCTGCGCAAGCTGCTGGAAGACCGGCATATCGATCTGGCCCTGGAT
GAACCGGCCCATCTGTGGCTGGCCGAGGAAGGCTACGACCCGGTCTACGGCGCGCGGCCGCTGAAGCGGGTGATCCAGCG
CACGCTGCAGAACCCGATGGCCGGACTGCTGCTGGATGGCACCATCCATGATGGCGAGACGGTAAAGGTCTCGGCGGATG
ATGTCGGCCTGACCATCAATGGCCGCTCGATCGCGGAGGTCTGA

Protein sequence :
MNIEKFTERSRGFLQAAQTIAVRDYHQQLTPEHLLKALLDDPEGAASSLIRAAGGQAPAVQAAVEAALAKVPRVQGGGAG
QPQATPDLVRLLDAAQTAAQKAGDEYVAQDRLLVAIAASDTPAGRALRDGGATAQALDKAVAAIRKGRTVTSENAEASFD
ALKKYARDVTEIAQQGKLDPVIGRDEEIRRAIQVLARRSKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALKNKKLLS
LDLGALVAGAKFRGEFEERLKAVLKEIESAEGQVILFIDEMHTLVGAGRTDGAMDASNLIKPELARGTLHCIGATTLDEY
RKYIEKDAALARRFQPVYVGEPSVPDTISILRGIKEKYELHHGVRITDNALVAAATLSNRYITDRFLPDKAIDLVDEAAS
RLRMQIDSKPEELDELDRRLIQLKIEREAIRKEDDSASRERLVKLEAELADIEEKSNAMSAAWHAEKDRVNAVQKLKEQL
DQARSDVEVAQRRGDLGRASELMYGVIPNLQEKIAQAQEENESAAQGAGLVSEAVTEQGIASVVSRWTGVPVDRMLEGER
AKLLRMEDELRRSVVGQEPALKAVANAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELCKALARFLFDDEKALLRVDMSE
FMEKHAVSRLIGAPPGYVGYEEGGVLTEAARRRPYQVILFDEVEKAHEDVFNVLLQVLDDGRLTDGQGRTVDFRNTIIVL
TSNLGSDVLAHLPDNESTEMVQAEVMKVVRAHFRPEFLNRLDEIILFSRLQRADMTRIVDIQIARLRKLLEDRHIDLALD
EPAHLWLAEEGYDPVYGARPLKRVIQRTLQNPMAGLLLDGTIHDGETVKVSADDVGLTINGRSIAEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-104 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 8e-105 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gdia_1762 YP_002276141.1 ATP-dependent chaperone ClpB VFG2076 Protein 4e-117 45
Gdia_1762 YP_002276141.1 ATP-dependent chaperone ClpB VFG2084 Protein 3e-107 42