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Name : OCAR_6362 (OCAR_6362) Accession : YP_002289340.1 Strain : Oligotropha carboxidovorans OM5; ATCC 49405 Genome accession: NC_011386 Putative virulence/resistance : Unknown Product : shikimate transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 2304749 - 2306104 bp Length : 1356 bp Strand : - Note : - DNA sequence : TTGATGAAAACAGGGGAGGATATGACTATGAGTTCAACCAAAGAGGGCGCCGGGGAGCCCCCGCGCCGCCAATATGTGGT CGCAGGCCTTGCGAGCATGATAGGCACCACCATCGAGTGGTATGATTTCTTCCTGTACGGCTCAGCCGCTGCGCTGATCT TCAACAAGATCTTTTTCCCGAGTTTCGATCCGATTTCCGGCACGCTCGCCGCGTTCGCGACCTATTCGGTCGGCTTCTTC GCACGTCCGCTCGGCGGCATTGTGTTCGGTCATTTCGGCGATCGCGTCGGCCGCAAATCGATGCTGCTCATCACACTGGT GCTGATGGGCGTTCCGACGATGCTGATCGGCCTCATCCCATCCTACGAAACCATCGGCTATTGGGGCGCGGTGTTGCTCG TCATCATGCGCTTCCTTCAGGGCGTCGCTGTCGGCGGCGAGTGGGGCGGAGCCGTGCTGATGGCGGTTGAACACGCGCCG GAGGGCAAGAAGGGATTGTTCGGCAGTCTGCCGCAGGCAGGCGTCGGTCCCGGATTGCTGCTGTCATCGCTCGCGCTCAG CATGGTCGCGGCGCTGCCCGAAAAAGACATGCTGACGTGGGGCTGGCGTCTGCCGTTCCTCGCGAGCGTCGTGCTGCTCG GCATCGGCTGGTTCATCCGCATCAAGGTCGCAGAGTCGCCGGACTTCGAGGTGATGGAAAGCAAGGGCAAGAAGGTCGGA ATGCCGGTCGTCGAAGTCTTCCGCCGCTATCCGCGTGAAGTGCTCGCGGTGATCGGTGCGCGGCTTGGCGAAGTCACATG GTTCTACACCGTGGCCAGCTTCTCGCTCGCCTATGCCGCCGGCACGCTCTCCATCCCGCGGACGGTGATCCTCGACGCCA CCATCTGGGGCGCGAGTTTCCTTCTGTTCACCGTGCCGATCTTCGGCATCCTCGGCGACAAGCTCCAGCACAAATGGGTG TTCATGATCGGCGCGGTCGGTGTGGTGATCTGCGCCCCGATCTTCTTCAGCCTGCTCGCGACCAAGGATGTCTTCTGGAT CAACGTCGCCATGGTCATGGCAATCAGCCTTGTGTACGCCAGCCTCTACGGCCCGGAGGGCTCGCTGTTCTCCAATCAAT TCCCGCCGGAGGTTCGCTACACCGGCATCTCGATTGGTGTTCAGGTCTCCGGCGCGCTGGGTGGCGGTTTGGCCCCGATC ATCGCGACCTGGCTGCTTGCGCGTAACAATGGCGATCCGCAATATGTCGTCTGGTATCTGAGCGCGCTCGCCGTGATTGC CTTCTTCAGTGCGTGGAGCATGCATGCGGCCTCGAAGTACTCGGCGTCGGCGCGGGAGGCGGCGGCAACAGCATGA Protein sequence : MMKTGEDMTMSSTKEGAGEPPRRQYVVAGLASMIGTTIEWYDFFLYGSAAALIFNKIFFPSFDPISGTLAAFATYSVGFF ARPLGGIVFGHFGDRVGRKSMLLITLVLMGVPTMLIGLIPSYETIGYWGAVLLVIMRFLQGVAVGGEWGGAVLMAVEHAP EGKKGLFGSLPQAGVGPGLLLSSLALSMVAALPEKDMLTWGWRLPFLASVVLLGIGWFIRIKVAESPDFEVMESKGKKVG MPVVEVFRRYPREVLAVIGARLGEVTWFYTVASFSLAYAAGTLSIPRTVILDATIWGASFLLFTVPIFGILGDKLQHKWV FMIGAVGVVICAPIFFSLLATKDVFWINVAMVMAISLVYASLYGPEGSLFSNQFPPEVRYTGISIGVQVSGALGGGLAPI IATWLLARNNGDPQYVVWYLSALAVIAFFSAWSMHAASKYSASAREAAATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 1e-60 | 42 |
