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Name : ccmF (OCAR_6574) Accession : YP_002289551.1 Strain : Oligotropha carboxidovorans OM5; ATCC 49405 Genome accession: NC_011386 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2519958 - 2521943 bp Length : 1986 bp Strand : - Note : - DNA sequence : ATGATCGTCGAAGGCGGCCATTATGCGCTGGTGCTGGCGCTCGCCCTTGCACTGATCCAGTCGGTGGTGCCGCTGATCGG CGCCCGCATCAACGATCCTGCGCTGATGAACGTGTCGCGCTCCACCGCGCTCGCACAGTTCGCGTTCGTGCTGATCTCGT TCGTTGCGCTGATCTCGCTGCATGTTCTGTCGGATTTCTCCGTCGCCAACGTCTACGAGAATTCGCACTCGCTGAAGCCG CTGATCTACAAGATCACCGGCGTCTGGGGAAATCATGAAGGCTCGATGCTTTTGTGGGTGTTCATCCTCGCGTTGTTCGG CGCGATGGTCGCACTGTTCGGCGTCAACCTGCCGCCCTCGCTGCGCGCGCATGTGCTCGCGGTGCAGGGATGGATCGCGA CCGCGTTCTATCTTTTCATCCTGCTGACCTCGAATCCGTTCCTGCGGATCGCACGTCCGCCGATCGAGGGCCGCGACCTC AATCCCGTGCTGCAGGACCCCGGCCTCGCGCTGCATCCGCCGATGCTTTATCTCGGCTATGTCGGGTTTTCGATTTCTTT TTCCTTCGCTATCGCCGCCCTGATCGAGGGTCGCATCGATGCCGCCTGGGCGCGCTGGGTGCGGCCGTGGACGCTGATGG CGTGGATCTTCCTCACCCTCGGTATCGCGATGGGCTCCTACTGGGCCTATTACGAACTTGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTCGAGAACGCGTCCCTGATGCCGTGGCTCGCCGGCACCGCGCTGCTGCACTCCGCGGTGGTGATGGAAAA GCGCGAGGCGCTGAAAATCTGGACCGTGCTGCTTGCGATCCTCACCTTCTCGCTGTCGCTCCTCGGCACATTTCTCGTGC GCTCGGGCGTGCTCACCTCGGTCCATGCGTTTGCGACCGATCCCACCCGCGGCGTCTTCATCCTCATTATCCTTTGCGTC TTCATCGGCGGCAGCCTGACGTTCTATGCGTGGCGCGCGGCCTCGCTGAAGCAGGGCGGGCTGTTCGCGCCGATCTCGCG TGAAGGCGCGCTCGTCCTCAACAATCTGTTGCTGACGACGGCCTGCGCCACCGTGTTCGTCGGAACACTGTATCCGCTGG CGCTCGAGGTGTTGACCGGCGCCAAGATTTCCGTCGGCGCGCCGTTCTTCAATCTCACCTTTGCGCCGCTGTTCGTGCCG CTTCTTGTCGCCGTGCCGTTCGGCCCATTGCTCGCCTGGAAGCGCGGCGATCTTCCGGGCGCGATGCAGCGTCTGATGAT GGCGGGCGTCGTTTCTCTTGTGACCATTGCCATCGTCTGGGCATGGCAGAGCGGCGGGGCTGCGCTCGCGCCGTTCGCGA TCGGGCTTGCGGTGTTCGTGGTGCTCGGCGCGATCGTCGACATCGCGGAGCGCGTGAAGCTGTTTCAGGCGTCGTTCAAC ACCTCATGGCACCGCGCCAAGGGCCTGCCGCGTTCCGCGTGGGGCACGGCGTTCGCGCATGCGGGCCTTGGCATCGCGCT GATCGGCATCGTCTGCGAGTCGACATGGAACATCGAGCACATCGCAACGATGCGCCCGAACGACACCGCGCAGCTCGGCG CCTACAGCGTGACGTTCAACGGTTTGAGAGCGCAGCAGGGTCCGAACTATCGCGAGGATATCGCAGCGTTCACTATCCGC AGCGATGACCGCGTGGTCGGCACCATGACGCCCTCGAAGCGCAATTTCTCAACCCGCGGCATGGCGACGAGCGAGGCGGC GCTGCTGACGCGTGGCGCGAGCCAGCTCTATATCTCGCTCGGCGCGGCGGAGGCCGATGGCTCGATCACCGCGCGGATCT ACTACAAGCCGCTGGTGCTGCTGATCTGGTTCGGTCCGATCCTGATGGCGTTCGGCGGCATGCTGTCGCTGTCCGATCGC CGCCTGCGCGTCGGCGCGCCGAAGCCCGCGCGCGCCAAGCTCGGCGTTCCGCAGCCTGCGGAGTAG Protein sequence : MIVEGGHYALVLALALALIQSVVPLIGARINDPALMNVSRSTALAQFAFVLISFVALISLHVLSDFSVANVYENSHSLKP LIYKITGVWGNHEGSMLLWVFILALFGAMVALFGVNLPPSLRAHVLAVQGWIATAFYLFILLTSNPFLRIARPPIEGRDL NPVLQDPGLALHPPMLYLGYVGFSISFSFAIAALIEGRIDAAWARWVRPWTLMAWIFLTLGIAMGSYWAYYELGWGGWWF WDPVENASLMPWLAGTALLHSAVVMEKREALKIWTVLLAILTFSLSLLGTFLVRSGVLTSVHAFATDPTRGVFILIILCV FIGGSLTFYAWRAASLKQGGLFAPISREGALVLNNLLLTTACATVFVGTLYPLALEVLTGAKISVGAPFFNLTFAPLFVP LLVAVPFGPLLAWKRGDLPGAMQRLMMAGVVSLVTIAIVWAWQSGGAALAPFAIGLAVFVVLGAIVDIAERVKLFQASFN TSWHRAKGLPRSAWGTAFAHAGLGIALIGIVCESTWNIEHIATMRPNDTAQLGAYSVTFNGLRAQQGPNYREDIAAFTIR SDDRVVGTMTPSKRNFSTRGMATSEAALLTRGASQLYISLGAAEADGSITARIYYKPLVLLIWFGPILMAFGGMLSLSDR RLRVGAPKPARAKLGVPQPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-111 | 45 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 3e-93 | 45 |
