Gene Information

Name : OCAR_4577 (OCAR_4577)
Accession : YP_002287586.1
Strain : Oligotropha carboxidovorans OM5; ATCC 49405
Genome accession: NC_011386
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : 3.6.3.-
Position : 568693 - 569505 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence : 
ATGACACCAGAACTCCCGGCCACGGCGAGGCAGGCCGCCGCGACCAAAAACATCCGTGCGCGCCTCTCGACCGCGGCTGC
GAAACTCCCATATGGCAGGGGCATGGATACTCTCACCGCTCTCTCACAGCCGGCCACCGCCGGCTCACCCGTCATCTCAC
TCTCCGGCATCGACCTGTCCCTCGGACGGGGCGCCGCAAAAGTCCATATCCTCAAGGGAATCGACTTGCACGTCGCGCCC
GGTGAAACCGTTGGCCTGATCGGCCCATCCGGTTCGGGCAAATCGACGCTGCTCATGGTCATGGCCGGGCTGGAGAGGCC
CGATGCCGGAGAAGTGGTGGTGCAGGGCACATCTTTCAACGCCCTCGACGAGGATGGTCTCGCACGGTTTCGTGGCCGCG
AGATCGGCATCGTGTTTCAATCGTTCCATCTGATCCCGACCATGACCGCGCTCGAGAACGTCGCGGTGCCGCTCGAACTT
GCAGGCAAGAAAGATGCAGCGGAGCGTGCCGCGCGCGAGTTGCAGGCGGTCGGCCTCGGCGAGCGGCTTCATCATTATCC
CGCCGAACTCTCCGGCGGCGAGCAGCAGCGCGTGGCGCTTGCACGCGCACTCGCACCCGATCCCGCAATTCTTCTCGCCG
ATGAGCCGACCGGCAATCTCGACGAGGCGACCGGCAAGCAGATTGCCGATCTGCTGTTCGATCTACACAAGGCGCGCGGC
ACGACGCTGGTGCTGGTGACACACGATGCAACGCTGGCGCAGCGCTGCGGCCGCACCGTGAAACTGCGCTCGGGCCACAT
CGATGGCGCTTAA

Protein sequence : 
MTPELPATARQAAATKNIRARLSTAAAKLPYGRGMDTLTALSQPATAGSPVISLSGIDLSLGRGAAKVHILKGIDLHVAP
GETVGLIGPSGSGKSTLLMVMAGLERPDAGEVVVQGTSFNALDEDGLARFRGREIGIVFQSFHLIPTMTALENVAVPLEL
AGKKDAAERAARELQAVGLGERLHHYPAELSGGEQQRVALARALAPDPAILLADEPTGNLDEATGKQIADLLFDLHKARG
TTLVLVTHDATLAQRCGRTVKLRSGHIDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-24 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCAR_4577 YP_002287586.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 4e-33 49
OCAR_4577 YP_002287586.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 1e-33 46