Gene Information

Name : OCAR_4853 (OCAR_4853)
Accession : YP_002287855.1
Strain : Oligotropha carboxidovorans OM5; ATCC 49405
Genome accession: NC_011386
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 826416 - 827126 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence : 
ATGGGCAGCGGCGGAATCCTCATCGAAAAAATCAGGAAGCGGTATGGCAGCGGCGATACCGCGGTCGACGCCCTGAAAGA
CATCAATATGCAGGTTGCACCCGGCGAGGTGGTCGGCCTGATCGGCCCGTCGGGCTCGGGCAAGAGTACGTTGCTCAAAG
CCCTGGGTGCGGTCATCGACCCGACTGGTGGGCGCATGACCCTCGGCGACGAGACGATCTATAATGATAGCTGGAGCATC
CCTGATCTTCGCGCGTTGCGACGCGACAAGATCGGCTTCGTCTTCCAGGCACCCTACCTCATCCCCTTTCTGGACGTCAC
CGACAATATCGCGCTGCTACCCATGCTGGCCGGCGTCCCCAACAATGAATCCCGTCGACGCGCGCGGGAACTTCTAAAGG
CGCTTGATGTCGAACATCGCGCTACTGCAATGCCCTCGCAACTTTCCGGTGGTGAACAGCAACGGGTTGCGATCGCGCGC
GGCCTGATCAACCGTCCGCCGGTCGTCCTTGCCGACGAACCCACGGCGCCGCTCGACAGCGTGCGAGCCCTCACCGTGAT
CCGCATTCTCAATGAAATGGCCGCTCAATTCGGAACAGCCATCATCGTCGTCACGCACGATGAGAAGATCATCCCGACCT
TCAAGCGCATCTACCATATCAGAGATGGCGTAACTATCGAAGAGGCTGGAGAGGGGCGCGGTTTCGAATGA

Protein sequence : 
MGSGGILIEKIRKRYGSGDTAVDALKDINMQVAPGEVVGLIGPSGSGKSTLLKALGAVIDPTGGRMTLGDETIYNDSWSI
PDLRALRRDKIGFVFQAPYLIPFLDVTDNIALLPMLAGVPNNESRRRARELLKALDVEHRATAMPSQLSGGEQQRVAIAR
GLINRPPVVLADEPTAPLDSVRALTVIRILNEMAAQFGTAIIVVTHDEKIIPTFKRIYHIRDGVTIEEAGEGRGFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OCAR_4853 YP_002287855.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 2e-37 44
OCAR_4853 YP_002287855.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 3e-28 41