|
Name : ccmE (RC1_3017) Accession : YP_002299197.1 Strain : Rhodospirillum centenum SW Genome accession: NC_011420 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmE Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG2332 EC number : - Position : 3095500 - 3096006 bp Length : 507 bp Strand : + Note : part of the cytochrome c-type biogenesis protein cluster identified by match to protein family HMM PF00890 match to protein family HMM PF02910 match to protein family HMM PF07992 match to protein family HMM TIGR00551 DNA sequence : ATGACCCGCAAGAAGCGTCGCCTCTACATGCTGGGCCTCGCCCTGCTGGGGCTGGGCACCGCCACGGCGCTGACCCTGTC GGCGTTCGAGGAGAACATCGTCTTCTTCTACAGCCCCTCGGATCTGGTGGTGCAGCCGCCGGGCGACCGCTCCGTGCGGC TGGGCGGGCTGGTCGAGGACGGCAGCGTCCAGAAGCAGGCGGACGGCCTGACCATCACCTTCCGCGTGACCGACACGGCC AACACCGTCCCCGTCACCTACAAGGGCATCGTCCCCGACCTGTTCCGTGAGGGTCAGGGCGTGGTGGCGGAGGGCCGGAT GGGCGGCGACGGGGTGTTCGTCGCCCGTGAGGTGCTGGCCCGGCATGACGAGAACTACATGCCGCCCGAGGTCCATGACG CGCTGCAACGCGCCGGCGCGGTCAAGACCGAGGTGCCCGGCCGCTCCATCTACACCCCGGCGGATTCGGACGACAAGGTT CACGCGACCACCACGCTGAAACCCTAG Protein sequence : MTRKKRRLYMLGLALLGLGTATALTLSAFEENIVFFYSPSDLVVQPPGDRSVRLGGLVEDGSVQKQADGLTITFRVTDTA NTVPVTYKGIVPDLFREGQGVVAEGRMGGDGVFVAREVLARHDENYMPPEVHDALQRAGAVKTEVPGRSIYTPADSDDKV HATTTLKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cycJ / ccmE | AAN62107.1 | putative cytochrome C-type biogenesis protein CycJ | Not tested | PAGI-2(C) | Protein | 2e-28 | 51 |
| ccmE | YP_217242.1 | cytochrome c-type biogenesis protein CcmE | Not tested | SPI-12 | Protein | 7e-21 | 44 |
