|
Name : HPP12_0221 (HPP12_0221) Accession : YP_002300860.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : - Position : 225356 - 226519 bp Length : 1164 bp Strand : + Note : involved in [Fe-s] cluster synthesis DNA sequence : TTGTTACAACGAATTTATTTAGACAATAACGCTACAACTAGGATTGACCCTAAAGTCAAAGAGATCATGGATCCTTTTTT AAGGGATCATTACGGGAACCCTAGCTCGTTGCACCAGTTTGGCACAGAAACCCACCCAGCCATTGCAGAAGCGCTAGATA AGCTTTATAAAGGCATTAACGCTAGGGATATAGATGATGTGATCATCACTTCTTGCGCGACAGAAAGCAATAATTGGGTT TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAAGGCAAAAACCATATTGTAACCACGGTTGCAGAGCATCCGGCGGT GCGATCCACTTGTAATTTTTTAGAAAGCTTGGGGGTGGAGGTTACTTACTTGCCCATTAATGAGCATGGGAGTATCACCG CCGAGCAAGTCAAAGAAGCGATCACAGAAAAAACCGCTCTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTATTGAAGAAATTGGGGCTATTTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCCGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTAAAAGCGAATGCGGATTTCCTTTCTTTTAGCGCGCACAAGTTTCATGGGCCTAAAGGCATTG GGGGGTTGTATATTAGAAGTGGGGTGGGATTGACCCCTCTTTTTCATGGCGGGGAGCATATGAATGGCAGGCGCAGCGGG ACTTTGAACGTGCCTTATATTGTGGGCATGGGCGAAGCGATGAAATTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTAGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTGGGGGATCGAATCCATC GTGTGCCTAACACGACTTTAGTCAGCGTGAGAGGGATTGAAGGAGAGGCCATGCTGTGGGATTTGAATCGCTCCAATATC GCCGCTTCCACAGGGAGCGCGTGTGCGAGTGAGGATTTAGAGGCTAATCCTGTCATGGTAGCGATTGGAGCGAGTAAGGA ATTAGCTCATACCGCTATCAGGCTTTCATTGAGCCGTTTTAACACGGAAGCTGAAATTGATAAAACGATTGAAGTTTTCT CTCAAGCGGCTATAAGATTGAGAAACATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIVTTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITAEQVKEAITEKTALVSVMWANNETGLI FPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANADFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRIHRVPNTTLVSVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAIRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 7e-49 | 41 |
