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Name : rnhA (HPP12_0674) Accession : YP_002301307.1 Strain : Helicobacter pylori P12 Genome accession: NC_011498 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 718207 - 718773 bp Length : 567 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : TTGAATACCGCTGCAAGCATTGCAAACAAATCTTTCCTTTTGAAAGCCATAGGTGTCCTGTGTGTTACCAGTTGGCGTTT ATGGATATGGTGCTTAAAATTTCTAAAAAAACGCATGCTATGGGAGTGGATTGAATGCAAGAAATTGAAATTTTTTGCGA TGGTTCTTCATTTAGGCAATCCCGGGCCAGGCGGGTATGCAGCGATTTTACGCTATAAAGATAAAGAAAAAATCATCAGT GGGGGCGAACATTTCACCACGAATAACCGCATGGAATTAAGAGCGCTCAATGAAGCGTTAAAAATTTTGAAACGCCCATG CCATATCACGCTTTATAGCGATTCGCAATACGTGTGCCAAGCGATCAATGTGTGGCTAGCTAACTGGCAAAAAAAGAATT TTTCTAAAGTTAAAAATGTGGATTTATGGAAAGAATTTTTAAAAGTCTCTAAAGGGCATTTGATTGTGGCTGTTTGGATC AAGGGGCATAACGGGCATGCCGAGAATGAACGATGCGATAATCTCGCTAAATTAGAGGCGCAAAAACGGGTCAAAACGAC CACTTAA Protein sequence : MNTAASIANKSFLLKAIGVLCVTSWRLWIWCLKFLKKRMLWEWIECKKLKFFAMVLHLGNPGPGGYAAILRYKDKEKIIS GGEHFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVWLANWQKKNFSKVKNVDLWKEFLKVSKGHLIVAVWI KGHNGHAENERCDNLAKLEAQKRVKTTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-24 | 48 |
