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Name : swp_1679 (swp_1679) Accession : YP_002311040.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Unknown Product : SecD/SecF/SecDF export membrane protein:SecD export membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1738044 - 1739876 bp Length : 1833 bp Strand : + Note : - DNA sequence : ATGTGGAAAAACCTTATGGTGATGATTATCATCGCCATAGGTGGATTCTATGCGATACCAAACCTATTCGGTGAGGACCA TGCAGTACAGGTGGTTGCAACCCGAGGAGCCGAGGTGACAGCGTCGACTCAGTCGGCAGTAAATGATGTATTAGTAAGCA AAGGTATTGCTGTTAAGCGATCTGAGCTTGAAAATGGTCAATTATTAGTTCGTGTTGGCAATGGTGAAGAACAGTTGCTT GCTAAAGAAGCTATTGCTGAGGCACTTGGCGATAAGTTTACGGTGGCGTTAAACCTTGCACCCGCAACTCCAGAGTGGCT TGAAGCCATGGGCGGATCGCCTATGAAGCTAGGTCTTGATCTACGTGGTGGCGTTCACTTCTTAATGGAAGTCGATATGG GTGAAGCCGTGCGTAAAATGACCGAAGCTAAAGTGGCTGACTTCAGAACTGATTTACGTGCTGAGAGAATTCGCTATGCG GGTATTCGTAACGGCGCCAGAGGCATCGAAATCAAGTTCCGTGATGCAGAAACGTTAGCGAATGCCGAGCGTTTCCTAAA ATCACGTAGCGCTGACATGGTCTTCACCGATCGTTCTACTGGCAGTGATTATTTTCTTGTTGCTAATCCAAGTGATGTTT ATTTAAAACAGATCAAGGAAGAAGCACTACAGCAAAACATTACCACTTTACGTAATCGTGTGAACGAACTTGGTGTTGCC GAGCCAGTAGTACAGCGTCAAGGCGCTGAGCGTATTATTGTAGAGCTTCCTGGTGTTCAAGACACTGCGCGTGCAAAAGA GATTTTAAGTGCGACGGCGTCAATTGAGTTCCATATGGTTGACCAAAATGCTGACGTTCAAGCTGCAGCAAGTGGTCGTG TACCCGCGGGGTCTGAGCTCTATCAGCGCCGTGAAGGCGGTCCGGTCGTGCTTAAGAAAGCTGTAATGCTAACCGGCGAT CATATCCAAGGTGCGCAACCTAGCTACGATGAGTACAGTCGTCCACAAGTCTCTATTAACTTAGACTCTAAAGGTGGCTC TATCTTTTCCAATGTGACTAAAGACAACATAGGTAACCCTATGGCGACTTTATTCATTGAGTATAAAGATACTGGTGAGA AGAACGCTGATGGCAGCGTTAAAATGAAGAAGATTGAAGAAGTTATTTCAGTTGCAACGATTCAAGCTCGTCTTGGTCGT AACTTCGTTATCACAGGCCTTGGCCATGCAGAATCACAGAATCTTGCGTTGTTGCTACGTGCTGGTGCCTTGATTGCGCC AGTATACATTGTTGAAGAGCGTACTATTGGTCCGAGCCTAGGTGCTGAAAATATCGAAAACGGTATGCAAGCGATGATAT GGGGGATGGCGGTTGTGCTTCTCTTCATGTTGGTTTACTACCGTGGTTTTGGTCTTATTGCTAACCTTGCATTAACAGCT AACCTAGTCATGGTTGTGGGTGTTATGTCGATGATCCCAGGCGCCGTATTAACGCTGCCAGGTATCGCAGGTATGGTACT GACTGTTGGTATGGCAGTTGATGGTAACGTGCTTATTTACGAACGTATTCGTGAAGAATTGCGTAATGGTCGTAGTATTC AGCAAGCGATTCATGAAGGATATGGTAATGCGTTTTCAACCATTGCCGATGCCAACATTACTACCTTTATGACGGCACTT ATTCTATTTGCAGTCGGTACGGGTGCTGTTAAAGGCTTTGCGGTTACCTTAATGATCGGTATCGCCACGTCGATGTTTAC CTCTATTGTTGGAACACGTTCTATTGTGAACGCGATCTGGGGTGGTAAGCGCGTGAAGAAACTGTCTATCTAA Protein sequence : MWKNLMVMIIIAIGGFYAIPNLFGEDHAVQVVATRGAEVTASTQSAVNDVLVSKGIAVKRSELENGQLLVRVGNGEEQLL AKEAIAEALGDKFTVALNLAPATPEWLEAMGGSPMKLGLDLRGGVHFLMEVDMGEAVRKMTEAKVADFRTDLRAERIRYA GIRNGARGIEIKFRDAETLANAERFLKSRSADMVFTDRSTGSDYFLVANPSDVYLKQIKEEALQQNITTLRNRVNELGVA EPVVQRQGAERIIVELPGVQDTARAKEILSATASIEFHMVDQNADVQAAASGRVPAGSELYQRREGGPVVLKKAVMLTGD HIQGAQPSYDEYSRPQVSINLDSKGGSIFSNVTKDNIGNPMATLFIEYKDTGEKNADGSVKMKKIEEVISVATIQARLGR NFVITGLGHAESQNLALLLRAGALIAPVYIVEERTIGPSLGAENIENGMQAMIWGMAVVLLFMLVYYRGFGLIANLALTA NLVMVVGVMSMIPGAVLTLPGIAGMVLTVGMAVDGNVLIYERIREELRNGRSIQQAIHEGYGNAFSTIADANITTFMTAL ILFAVGTGAVKGFAVTLMIGIATSMFTSIVGTRSIVNAIWGGKRVKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-119 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 8e-120 | 47 |
