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Name : swp_2046 (swp_2046) Accession : YP_002311389.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Unknown Product : Cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2110952 - 2112931 bp Length : 1980 bp Strand : + Note : - DNA sequence : ATGATCCCAGAATTAGGACACTTTTCGCTGATTATTGGTGTGGCATTCGCCATGCTTTTAGCCATCGTCCCTTTAGTAGG TGTAGCTCGCAAAGACCAATATTTGGTGCGCTATGCTTGGCCATTAACATACGGAATGTTCTTTTTTATTCTGTTCTCCG TTGTCGCGCTCGGTTATAGCTTTGCCGTCGACGATTTTTCTGTCGCTTATGTAGCGCATCATTCGAACTCTGAATTGCCG ATCTTTTTCAAGATTGCAGCAGTCTGGGGTGGTCATGAAGGTTCACTGCTATTTTGGGTTTTCTCATTATCAGCATGGGC AGCCGCAGTAGCATTGTTTAGTAAAGGTTTAGAAGAGGTCTTTACTGCGCGTGTTCTAGCTGTGTTAGCCATGATTCTAA TTGGCTTCTCACTATTCATGTTGTTGACATCTAGTCCGTTCGAACGTCTATTCCCAATACCTATGGAAGGGCGTGATCTT AACCCAATGTTGCAAGATGTTGGCTTAATCTTCCATCCTCCTATGCTATATCTAGGTTATGTTGGTTTCTCTGTTAGCTT TGCGTTCGCTATCGCAGCGTTAATGAGTGGCCGACTAGACTCAGCTTGGGCTCGTTGGAGCCGTCCTTGGACGTTGGCAG CTTGGGTATTCCTAACTGGTGGTATCGCACTTGGTTCATGGTGGGCTTATTACGAACTTGGCTGGGGCGGTTGGTGGTTC TGGGATCCAGTAGAGAACGCATCATTTATGCCGTGGTTGATTGGTACGGCGCTTGTTCACTCTCTTATCGTAACTGAGAA GCGTGGCGCATTCCGTAACTGGACCGTTTTGTTGTCAATCTTCGCCTTCTCGTTAAGTTTGTTAGGTACCTTTATCGTGC GTTCAGGCGTACTGACATCTGTGCATTCATTTGCTGCTGACCCAAGTCGAGGAATGTTCATTCTCCTCTTACTCGGTTTA GCTGTCGGTGGTTCGCTGACCCTATTTGCTTTCCGAGCCAGTGAGATGAAGAGTCCTGCGCGCTTCCAGCTTAAGTCTAA AGAGACCATGCTGCTAGTGTGTAACCTGTTGCTAACTGTAGCCTGTGGTACCGTTCTACTTGGGACACTCTACCCACTGC TAATTGATGCTTTAGGTATGGGTAAAATATCTGTAGGACCTCCATACTTCAACGCAGTATTTGTTCCAATTGTCCTTGTG TTATTTGGCTTCATGGGTATTGGTCCTGTGATCCGCTGGAAGAAATCAAAAGATGGTGAGTTGAAACGTCAACTACTGAT CCCAGCAGTTATTGCGTCAGTCGTCGGACTTGCAGCACCGTTTCTTGCCGGTGGCGAATTTAATATCTGGGTTGCATTTG GTATTGGTACCGCAACTTGGGTGACAATTATGACATTCCGAGCTGCTTATAATATGGTTAAGACCAAAGAAGGCCCTGTC GATATGACTCGCCTTGGTCGAAGCCAGCTCGGTATGATTATTGCGCACTTAGGTATTGCTGTGTCAGTTGTTGGTGCCAC TATGGTCTCTAACTACTCGCTTGAGAAGAGTGTTCGAATGGGCCCTGGTGTTTCTCAAGAGCTAGCGGGTTATACCTTCA AATATGTTGAGACCAAAAACGTAGTGGGTCCTAACTACACTGCGCAGCAAGGTCAGATAGAAGTTTATCAAGATGACGAA TACGTCACATTGTTAAGACCTGATCGTCGCCAATATAATGTACGTACTATGGATATGACCGAAGCGGGAATTGATTGGGG ATTATTCCGTGACCTTTATGTCACAATGGGTGACCCTATCAGCCGTACCGAGTTTGCTGTTCGTCTTAACTATAAGCCAT TCGTACGCTGGTTATGGTTTGGATCGATCTTTATGATGGTTGGTGGTTTCTTTGCTGCTTCTGATAAGCGTTACAGAATC AAAGCAAAGAGCGCTGATAAGAAAGCTTCAGACAACAGTGACAAATTAGCAACGGCATAA Protein sequence : MIPELGHFSLIIGVAFAMLLAIVPLVGVARKDQYLVRYAWPLTYGMFFFILFSVVALGYSFAVDDFSVAYVAHHSNSELP IFFKIAAVWGGHEGSLLFWVFSLSAWAAAVALFSKGLEEVFTARVLAVLAMILIGFSLFMLLTSSPFERLFPIPMEGRDL NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALMSGRLDSAWARWSRPWTLAAWVFLTGGIALGSWWAYYELGWGGWWF WDPVENASFMPWLIGTALVHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AVGGSLTLFAFRASEMKSPARFQLKSKETMLLVCNLLLTVACGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLV LFGFMGIGPVIRWKKSKDGELKRQLLIPAVIASVVGLAAPFLAGGEFNIWVAFGIGTATWVTIMTFRAAYNMVKTKEGPV DMTRLGRSQLGMIIAHLGIAVSVVGATMVSNYSLEKSVRMGPGVSQELAGYTFKYVETKNVVGPNYTAQQGQIEVYQDDE YVTLLRPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPISRTEFAVRLNYKPFVRWLWFGSIFMMVGGFFAASDKRYRI KAKSADKKASDNSDKLATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-148 | 54 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-125 | 51 |
