Gene Information

Name : swp_2624 (swp_2624)
Accession : YP_002311947.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Unknown
Product : Malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 2753411 - 2755588 bp
Length : 2178 bp
Strand : -
Note : -

DNA sequence :
ATGACTCAATATATTCAAATTGGCGGTTTAAAGGTTGCTACAGAATTAGCTGAGCTGGTCAAAGCTGAGATTTGTCAAGA
TATTGGGATCTCGGCAGAAACTGTATGGACAAAGTTTGAAGAACTTATAGCTGAATTTGCACCTATTAACCGTCGCTTAT
TGGAAAAGAGAGAGCAGCTTCAACATCAACTTGATGAATGGCATGTTGGCCATAAGGGGCAAGACTTTAACTTAGAGTCG
TACAAAAGTTTCTTAACTGATATCGGTTATTTAGTGCCGGAAGGGGAAACATTCTCAATCAGTACTGAAAATGTAGATAC
AGAAATCACTGACCAGGCAGGTCCACAACTTGTGGTGCCGGTTAAAAATGCCCGTTTTGCTCTAAACGCTGCTAATGCAC
GTTGGGGTAGCCTATACGATGCATTATACGGTACTGATGCGATATCAGAGTCAAATGGTGCCGAACTAACCAAAACCTAT
AACCCTCAACGCGGCGCTAAAGTGATCGCTTTTGCAAAGCAGCACCTTGATACGGCAGCACCACTAATTCAAGCCTCTCA
TGCCGATGTAACCAAATATTGGATTGAAGGTGATCAATTAAAGGTATCCCTTGAGAATGGAGTAGAAACACAACTTGCTA
ACCCCGAGCGCTTTGCGGGTTATAAGGGAGCGGCCAAATCACCTGAAGCAATTTTACTTAAGAACAATGGCCTACATATA
GAGATCCAAATAGATGCAGTGAGTCTAATTGGCCAAAGTGATAAGGCGGGGGTCAGTGATCTTTTAGTTGAGGCAGCTGT
GACTACCATTATGGATTGTGAAGACTCTGTGGCTGCGGTTGATGCTGAAGATAAAGTCGAGATCTACCGTAATTGGCTTG
GTTTAATGCAAGGCAATTTGACTGCAACGCTTGCTAAAAACGGCAAAGATATTGTTCGAGAGCTTAATGATGACAGAAGC
TATACCGCAGCAAATGGACAGCAATTAGTATTACCTGGTCGTAGTTTATTGTTTGTCCGTAACGTTGGTCACTTAATGAC
AATCAATGCAGTATTAGATCAGCATGGTGAAGAGGTTCCTGAGGGGATCTTAGATGGCATGTTTACCGTACTAGCAGCGC
TACATGATATAAAAGGTCATAATAACAATCGCAGTAACAGCCGCAAGGGCTCAATTAACATAGTAAAGCCTAAGATGCAT
GGGCCTGAAGAGGTAAAGTTTACTTGTGAGTTGTTCACTAAAATTGAAGATGCGTTAAAGCTGGCCCGTAACACAATTAA
AGTCGGCATTATGGATGAAGAGCGCCGCACAACGGTCAATCTGAAAGAGTGTATTCGTGAAGCCTCTGAAAGAGTGGTAT
TTATTAATACTGGATTTTTAGATAGGACTGGCGACGAGATCCACACGTCAATGCAAGCAGGTCCATTTGTTGCGAAATCT
AAAATGAAACAGCAAAAGTGGATTGCAGCCTATGAAGATTGGAATGTTGATATTGGCTTGGAGTGTGGCCTGCAGGGACG
TTCGCAAATTGGTAAAGGCATGTGGCCAATGCCTGATGAAATGGCTGCAATGCTTGAGCAAAAGATTGGTCATCCGTTGG
CTGGTGCGAATACTGCTTGGGTTCCGTCTCCCAATGGTGCGGTTTTACATTCTACTCACTATCACAAAATTAATGTAAAG
GATGTGCAGAATGAATTGCAAAATCGTGACAGAGCAAGTTTAGATGACCTACTTACCATCCCACTTATGGCAGAGCCATC
TGAGCTATCCTCAGAGTTAAAGGCTTTTGAGTTGGAAAACAATGCACAAGGAATATTGGGCTATGTCGTCCGTTGGATTG
ACCAAGGCGTAGGTTGTTCCAAGGTACCTGATATTAATAATGTGGGATTGATGGAAGATAGGGCAACATTAAGGATCTCT
TCTCAGCATTTAGCGAATTGGTTAACACACGGCATATGCACCGAAGAAGAAGTCATGACCGCGCTTAAAAAGATGGCTGC
AATTGTTGATGAGCAAAACAAAGGTGATAGTCGCTACATTAATATGTCTCCTAGTTTCGATGGCATCGCATTTAAAGCGG
CTTGCGATCTAGTATTTAAAGGAACCACTCAGCCTTCTGGTTACACCGAGCCTTTATTACATGCTTATCGCATAAAGGCT
AAAGCTTTAGCACTTTAG

Protein sequence :
MTQYIQIGGLKVATELAELVKAEICQDIGISAETVWTKFEELIAEFAPINRRLLEKREQLQHQLDEWHVGHKGQDFNLES
YKSFLTDIGYLVPEGETFSISTENVDTEITDQAGPQLVVPVKNARFALNAANARWGSLYDALYGTDAISESNGAELTKTY
NPQRGAKVIAFAKQHLDTAAPLIQASHADVTKYWIEGDQLKVSLENGVETQLANPERFAGYKGAAKSPEAILLKNNGLHI
EIQIDAVSLIGQSDKAGVSDLLVEAAVTTIMDCEDSVAAVDAEDKVEIYRNWLGLMQGNLTATLAKNGKDIVRELNDDRS
YTAANGQQLVLPGRSLLFVRNVGHLMTINAVLDQHGEEVPEGILDGMFTVLAALHDIKGHNNNRSNSRKGSINIVKPKMH
GPEEVKFTCELFTKIEDALKLARNTIKVGIMDEERRTTVNLKECIREASERVVFINTGFLDRTGDEIHTSMQAGPFVAKS
KMKQQKWIAAYEDWNVDIGLECGLQGRSQIGKGMWPMPDEMAAMLEQKIGHPLAGANTAWVPSPNGAVLHSTHYHKINVK
DVQNELQNRDRASLDDLLTIPLMAEPSELSSELKAFELENNAQGILGYVVRWIDQGVGCSKVPDINNVGLMEDRATLRIS
SQHLANWLTHGICTEEEVMTALKKMAAIVDEQNKGDSRYINMSPSFDGIAFKAACDLVFKGTTQPSGYTEPLLHAYRIKA
KALAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 56