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Name : swp_1017 (swp_1017) Accession : YP_002310407.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Virulence Product : Type I secretion system ATPase, HlyB Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 1021974 - 1024298 bp Length : 2325 bp Strand : + Note : - DNA sequence : TTGAGTAATACGGTAATGGATTCCGGTCTTCATTCACTTGTCGCGATCGCGCGATTTCATCAGTTGCCAGCAGAGCCTGA GCAATTATCCCATGAGTTCGGTGTACCGGGCACATCATTTACTGATACTGAGATTTTGCTAGCAGCGAAAGCGCTGACTT TAAAAGCTAAGCAGCTGACTTTATCTATCTCTGAATTAAAAAATGGAGTTTTGCCTGCGATTGCCAAAGATAAGCAGGGC GGTTACTTTGTCATCGCTAGGCTATCGACAGATAATCTTTCTGAGTCTGCTGATAAAGTTGATGAGCAATTGGAGGCTAA CCAAGCTAAGACGAAACAAGATAGCATCCTAATCCATGACCTTGCTCAGGGGGCACCTCAATCGATATCAGTTGATGAGT TACAGCAGCGTTGGTCGGGTGAACTTATTGCATTGGTTAGGCGGCAAGGATTTGGTCAGAGTCTGCAGCAAAATTTTGAT ATTTCATGGTTTATTCCCTCCTTAGTTAAATACCGAAAACTGTTTAGTGAAGTCTTAATCGCTTCATTCTTTTTGCAACT TTTTGCCTTAGTCATCCCACTTTTCTTTCAAGTTGTGATGGATAAAGTTTTAGTACATCGCGGGTTTACCACTTTAGATG TGTTAGCTGTTGGTTTTTTTGTAGTAGTGGTATTCGAAGCCATATTAGGTGGTATTCGAAATTACACTTTTAGCCATACG ACAAACAGGGTCGATGTAGAGCTGGGATCGCGCCTTTTTCAGCATTTGCTAAATTTACCTCTCTCCTATTTTGAATCGAG GCAAGTAGGCCAAAACGTTGCTAGAGTCAGAGAGTTAGATACCATCCGTAATTTCATCACGGGTACAGCTCTGACGTTAG TGATAGATCTTCTGTTTGTTTTCGTTTTTTTGGCTGTGATGTGGTACTACAGCCCTACATTGACTTGGATCGTAATGGGT AGCATTCCATTTTATGTACTCCTATCCGTGTTTATTACTCCTATCTTGCGTCGCCGTCTTGATGAAAAGTTCAAACATGG TGCGGCCAACACTGCTTTTTTAACTGAGTCAATCACAGGCATTGGTACGGTTAAATCCATGGCTGTTGAACCTCAAATGC GACGTAAATTAGAAGACCATCTTTCAAGTTACGTTCACGCCTCTTTTCGCAGTCAAAACCTAGGCAATGTCGCGGGTCAA ATAGCAGGGCTTATTAATAAACTAGTTACGCTTGGGATCATCTGGGTGGGAGCACACTTAGTCATCGATGGGCATATAAG TGTTGGGCAGTTAGTCGCGTTTAATATGCTCGCAGGCCGAGTCAGTGGACCTATCTTAAAGCTGGTTCAACTTTGGCAAG ACTTTCAACAGGCAGGGATCTCTATCGAACGTCTGGGAGATATTTTAAATACACCGAAGGAACCAGGTTTCAATCCAAAT CGATCGCGCCTTCCTTCTTTGCAAGGTGCGATTAGCTTAGAGCATGTTCGTTTTCGATATAGACCCGATGGCCCAGTAAT TCTTAACGAGATTAATTTGCAAACACGCCCTGGCGAGGTGATTGGTATCGTCGGCCGCTCCGGATCTGGGAAAAGCACCA TAACCAAATTGGTTCAGAGGCTCTATATCCCAGAGTCTGGGCGAGTGTTAGTCGATGGGGTTGATCTATCTATGATTGAT ACGGCTTGGCTTCGTAAACAGATTGGGGTGGTGCTACAAGAAAACTTCTTGTTTAACCGTACGATCCGAGAAAATATTGC CCTAACCGACCCCTCTATTTCGATGGAACGTGTGGTTGCTGCCGCAAAGATGGCGGGAGCACATGAGTTTATTGTTGAGC TACCGGAAGGGTATGACAATATCGTGGGAGAGCAAGGTAGTAACCTATCTGGTGGACAGAGACAAAGATTGGCTATCGCG CGTGCGCTTATTGGTAATCCCCGTATTTTGATTTTTGATGAGGCGACCAGTGCGCTTGATTATGAGTCAGAGCGTTTAGT ACAAGACAATATGGCTCGGATCTGTAAAGGCCGTACTGTTTTTATAATCGCCCATCGCTTAACTACAGTGCGGCAGTGTA ACCGTATTATTGTGATGGATAAGGGCCGCATCGTAGAGCAAGGGAATCATGACAGCTTGATTGCTCACAATGGATACTAT GCCAAGCTGCACAGCTATCAAAGTCACACACCTAACTTACACCCAGTAGAACCTAATCAACCTAATTACTCCCAAACCAA GCAAGCCAGAGCTAGCTCTCAAAATAACAGGGTCAATAGATCGACTCCTTCAGCGGCTCAGCACCAAACTGGAGAGAAGA TATGA Protein sequence : MSNTVMDSGLHSLVAIARFHQLPAEPEQLSHEFGVPGTSFTDTEILLAAKALTLKAKQLTLSISELKNGVLPAIAKDKQG GYFVIARLSTDNLSESADKVDEQLEANQAKTKQDSILIHDLAQGAPQSISVDELQQRWSGELIALVRRQGFGQSLQQNFD ISWFIPSLVKYRKLFSEVLIASFFLQLFALVIPLFFQVVMDKVLVHRGFTTLDVLAVGFFVVVVFEAILGGIRNYTFSHT TNRVDVELGSRLFQHLLNLPLSYFESRQVGQNVARVRELDTIRNFITGTALTLVIDLLFVFVFLAVMWYYSPTLTWIVMG SIPFYVLLSVFITPILRRRLDEKFKHGAANTAFLTESITGIGTVKSMAVEPQMRRKLEDHLSSYVHASFRSQNLGNVAGQ IAGLINKLVTLGIIWVGAHLVIDGHISVGQLVAFNMLAGRVSGPILKLVQLWQDFQQAGISIERLGDILNTPKEPGFNPN RSRLPSLQGAISLEHVRFRYRPDGPVILNEINLQTRPGEVIGIVGRSGSGKSTITKLVQRLYIPESGRVLVDGVDLSMID TAWLRKQIGVVLQENFLFNRTIRENIALTDPSISMERVVAAAKMAGAHEFIVELPEGYDNIVGEQGSNLSGGQRQRLAIA RALIGNPRILIFDEATSALDYESERLVQDNMARICKGRTVFIIAHRLTTVRQCNRIIVMDKGRIVEQGNHDSLIAHNGYY AKLHSYQSHTPNLHPVEPNQPNYSQTKQARASSQNNRVNRSTPSAAQHQTGEKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 0.0 | 55 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 0.0 | 55 |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 0.0 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| swp_1017 | YP_002310407.1 | Type I secretion system ATPase, HlyB | VFG0907 | Protein | 0.0 | 55 |
| swp_1017 | YP_002310407.1 | Type I secretion system ATPase, HlyB | VFG1557 | Protein | 0.0 | 55 |
| swp_1017 | YP_002310407.1 | Type I secretion system ATPase, HlyB | VFG1501 | Protein | 0.0 | 55 |
| swp_1017 | YP_002310407.1 | Type I secretion system ATPase, HlyB | VFG0841 | Protein | 6e-176 | 54 |
| swp_1017 | YP_002310407.1 | Type I secretion system ATPase, HlyB | VFG1269 | Protein | 6e-180 | 52 |
