Gene Information

Name : Blon_1078 (Blon_1078)
Accession : YP_002322546.1
Strain : Bifidobacterium longum JCM 1222
Genome accession: NC_011593
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1257741 - 1258394 bp
Length : 654 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: cya:CYA_2048 ABC transporter, ATP-binding protein

DNA sequence : 
ATGAAGGCGTTTCCAGGCAAGGACGGGAGCGTGCTGGAGATATTGCATGATACATCGCTGGCCATCGATCGCGGCGAGCT
CGTGGCCATCGTCGGGCCGTCCGGCTCGGGCAAAAGCACGCTGTTGTCGTTACTGGGCACGCTGGACATGCCGACCTCGG
GAATAATGCGATACGACGGCGGGGATGTGAATGCGATGGGTGAGCGGCAGCGCAGCGTCCTGCGGGCCGCGCGCATCGGC
TTCGTGTTCCATCAGTTCCATCTGATCGCCACCGTAGCCGCCTTGGAGAACGCGATGACCGGCCTGCAATACACGACCAT
GCCGCGCGGCGAACGCCGGCAACGGGCCTCCGAGGCATTGGAACAGGTCGGATTGGGGAATCGCCTGCATCACCGGCCGG
CCCAGTTGTCGGGCGGCGAACAGCAGCGTGTGGCCATCGCCCGCGCCCTGGCCAAACGGCCGGACATCATCTTCGCCGAT
GAGCCGACCGGCCGATCGCCCTCGACTGGACCTCCCTGCCGCTCGCCTGGGCCGCCGCCATCCTGGTCGGCATCCTCGCC
GGCCTCTACCCGGCCTCCCGCGCCGCCCGTCTCACCGCGACCGAGGCCCTGCGCGGCGAATAGGGGCGACGGCTGGAGTG
AACGATCACCATGA

Protein sequence : 
MKAFPGKDGSVLEILHDTSLAIDRGELVAIVGPSGSGKSTLLSLLGTLDMPTSGIMRYDGGDVNAMGERQRSVLRAARIG
FVFHQFHLIATVAALENAMTGLQYTTMPRGERRQRASEALEQVGLGNRLHHRPAQLSGGEQQRVAIARALAKRPDIIFAD
EPTGRSPSTGPPCRSPGPPPSWSASSPASTRPPAPPVSPRPRPCAANRGDGWSERSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Blon_1078 YP_002322546.1 ABC transporter NC_012469.1.7686946. Protein 9e-17 46
Blon_1078 YP_002322546.1 ABC transporter CP001581.1.gene798.p Protein 2e-18 45