Gene Information

Name : shiA (E2348C_2088)
Accession : YP_002329603.1
Strain : Escherichia coli E2348/69
Genome accession: NC_011601
Putative virulence/resistance : Unknown
Product : shikimate transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 2142888 - 2144204 bp
Length : 1317 bp
Strand : +
Note : -

DNA sequence :
ATGGACTCCACGCTCATCTCCACTCGTCCCGATGAAGGGACGCTTTCGTTAAGTCGCGCCCGACGAGCTGCGTTAGGCAG
TTTCGCTGGTGCCGTCGTCGACTGGTATGATTTTCTACTCTATGGCATTACCACCGCACTGGTGTTTAATCGCGAGTTTT
TCCCGCAAGTAAGCCCGGCGATGGGAACGCTCGCCGCATTTGCCACCTTTGGTGTCGGTTTCCTTTTCCGACCGCTCGGC
GGTGTCATTTTCGGTCACTTTGGCGACCGACTGGGACGTAAGCGCATGTTAATGCTGACCGTCTGGATGATGGGCATCGC
GACAGCCTTGATTGGCATTCTTCCTTCCTTCTCTACCATTGGGTGGTGGGCTCCCATTTTACTGGTGACGCTGCGTGCCA
TACAGGGATTTGCCGTCGGCGGCGAATGGGGAGGCGCAGCGTTGCTTTCCGTTGAAAGTGCGCCGAAAAATAAAAAAGCC
TTTTACAGTAGCGGTGTACAAGTTGGCTACGGAGTAGGTTTACTGCTTTCAACCGGACTGGTTTCATTGATCAGTATAAT
GACGACTGACGAACAGTTTTTAAGCTGGGGCTGGCGCATTCCTTTCCTGTTTAGCATCGTACTGGTACTGGGAGCATTGT
GGGTGCGCAATGGCATGGAGGAGTCCGCGGAATTTGAACAACAGCAACATAATCAAGCGGCCGCGAAAAAACGCATCCCG
GTTATCGAAGCTCTGTTACGACATCCCGGTGCTTTCCTGAAGATTATTGCACTACGACTGTGCGAGTTGCTGACGATGTA
CATTGTTACTGCCTTTGCACTTAATTATTCAACCCAGAATATGGGGTTACCGCGCGAACTTTTCCTTAATATTGGTTTGC
TGGTAGGTGGATTAAGCTGCCTGACAATTCCCTGTTTTGCCTGGCTTGCCGATCGTTTTGGTCGGCGCAGGGTTTATATC
ACAGGCGCGTTGATCGGAACGTTGAGCGCATTTCCTTTCTTTATGGCGCTTGAAGCACAATCTATTTTCTGGATAGTTTT
CTTCTCCATAATGCTGGCAAACATTGCGCATGATATGGTGGTGTGTGTGCAACAACCGATGTTTACCGAAATGTTTGGTG
CCAGTTATCGCTACAGTGGTGCTGGAGTCGGTTATCAGGTTGCCAGTGTGGTTGGCGGTGGATTTACACCTTTTATTGCC
GCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCTGCAAT
GACCGCTTTGTTGATGAAAGACAATCAACGCGCTTGA

Protein sequence :
MDSTLISTRPDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGITTALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLG
GVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKA
FYSSGVQVGYGVGLLLSTGLVSLISIMTTDEQFLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHNQAAAKKRIP
VIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNMGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYI
TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIA
AALITYFAGNWHSVAIYLLAGCLISAMTALLMKDNQRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1067 YP_853084.1 shikimate transporter Not tested PAI IV APEC-O1 Protein 0.0 99