Gene Information

Name : LMHCC_1430 (LMHCC_1430)
Accession : YP_002350389.1
Strain : Listeria monocytogenes HCC23
Genome accession: NC_011660
Putative virulence/resistance : Resistance
Product : macrolide export ATP-binding protein/permease MacB
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1452703 - 1453431 bp
Length : 729 bp
Strand : -
Note : macrolide export ATP-binding/permease MacB

DNA sequence : 
ATGCCAGAGAAAAAAGGACGAGATAAAATGACCTATGTAGAAATGAAAGATGTCTCTAAATACTATCAAATGGGCGAGAA
CGTTGTCACTGCTAATGATAAAATCGCTTTCGGGATAAAAAAAGGTGAATTTGTTGTTATAGTCGGACCTTCCGGGGCCG
GGAAATCAACCGTTTTGAACATTCTAGGTGGAATGGATAGTGCAAGTGAAGGCAAAATTATGGTAGATGGGCAGGATATT
GCTCAATATAATGCAAAACAATTAACTAAATATCGGCGAACAGATGTCGGCTTTGTATTCCAATTTTACAATTTGGTACC
TAATTTGACTGCTAAAGAGAACGTAGAATTAGCTGCACAAATTGCGCCAAATGCATTAGACGCAGAAACTGTTTTAACTC
AAGTTGGATTAAGTCACAGATTAGACAATTTTCCAGCACAACTATCTGGCGGGGAACAACAGCGTGTCGCCATAGCGCGT
GCGCTTGCTAAAGCACCGAAACTACTTTTATGCGATGAGCCAACCGGGGCACTTGATTACGATACGGGAAAATCAGTCTT
AAAATTACTACAAGAAACTTGCCGTAACACGGGAACAACCGTTATTGTTATTACCCATAACACAGCGATTACGCCAATTG
CAGATCGAATTATTGAAATTAATAATGCAAAAGTTCGCAGCATCAAAGAAAATCCAGAACCAATGTCGATTGATGATTTA
GAATGGTAG

Protein sequence : 
MPEKKGRDKMTYVEMKDVSKYYQMGENVVTANDKIAFGIKKGEFVVIVGPSGAGKSTVLNILGGMDSASEGKIMVDGQDI
AQYNAKQLTKYRRTDVGFVFQFYNLVPNLTAKENVELAAQIAPNALDAETVLTQVGLSHRLDNFPAQLSGGEQQRVAIAR
ALAKAPKLLLCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHNTAITPIADRIIEINNAKVRSIKENPEPMSIDDL
EW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMHCC_1430 YP_002350389.1 macrolide export ATP-binding protein/permease MacB NC_012469.1.7685735. Protein 1e-66 64
LMHCC_1430 YP_002350389.1 macrolide export ATP-binding protein/permease MacB CP001581.1.gene798.p Protein 7e-37 44
LMHCC_1430 YP_002350389.1 macrolide export ATP-binding protein/permease MacB CP001581.1.gene598.p Protein 3e-38 42
LMHCC_1430 YP_002350389.1 macrolide export ATP-binding protein/permease MacB NC_008702.1.4606598. Protein 9e-29 41